RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 LSM1O15116 133 aaKnown RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 PCDHGA12O60330 932 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 ACSL4O60488 711 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 ASMTLO95671 621 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 ADSSP30520 456 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 KIR2DL1P43626 348 aaPredicted RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 GEMIN4P57678 1058 aaKnown RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 LRRC23Q53EV4 343 aaPredicted RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 HSP90B2PQ58FF3 399 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 FAM171BQ6P995 826 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 RFWD3Q6PCD5 774 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 MFSD2AQ8NA29 543 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 BTN2A2Q8WVV5 523 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 JPH3Q8WXH2 748 aaPredicted RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 DUSP16Q9BY84 665 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 DPEP2Q9H4A9 486 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 DDIT4Q9NX09 232 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 KLHL42Q9P2K6 505 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 LCTP09848 1927 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 LOXHD1Q8IVV2 1947 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 ABCA12Q86UK0 2595 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 A0A1B0GTQ1 180 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 TARSL2A2RTX5 802 aaKnown RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 ERVH48-1M5A8F1 160 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 CHUKO15111 745 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 VILLO15195 856 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 THAP12O43422 761 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 STC2O76061 302 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 SLU7O95391 586 aaKnown RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 LTFP02788 710 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 TCF3P15923 654 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 PRLRP16471 622 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 ENPP1P22413 925 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 DMPKQ09013 629 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 C4orf17Q53FE4 359 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 USP30Q70CQ3 517 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 CCDC80Q76M96 950 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 C12orf40Q86WS4 652 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 RBM41Q96IZ5 413 aaKnown RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.8□□□□□ -1.16
GNE-205ENST00000539815 METTL14Q9HCE5 456 aaKnown RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.8□□□□□ -1.16
GNE-205ENST00000539815 SFMBT1Q9UHJ3 866 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 KLF15Q9UIH9 416 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 LAMA2P24043 3122 aaKnown RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 PVALEFA0A1B0GWK0 134 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 TTLL8A6PVC2 850 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 B8ZZF3 427 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 PRRT4C9JH25 899 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 SIN3BO75182 1162 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 NR0B2Q15466 257 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 CCDC142Q17RM4 750 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 AMZ1Q400G9 498 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 ZNF542PQ5EBM4 170 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 PRRT3Q5FWE3 981 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 TTC7BQ86TV6 843 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 DCP2Q8IU60 420 aaKnown RBP7.79□□□□□ -1.16
GNE-205ENST00000539815 SPACA3Q8IXA5 215 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 STK40Q8N2I9 435 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 C12orf29Q8N999 325 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 OLIG1Q8TAK6 271 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 DNASE2BQ8WZ79 361 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 SPAG5Q96R06 1193 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 SLC29A3Q9BZD2 475 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 RAI2Q9Y5P3 530 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 CBX4O00257 560 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 WNT7AO00755 349 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 BRINP1O60477 761 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 ADAM23O75077 832 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 WISP1O95388 367 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 TRIM49P0CI25 452 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 TRIM49CP0CI26 452 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 CASP4P49662 377 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 KCNA1Q09470 495 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.79□□□□□ -1.16
GNE-205ENST00000539815 DCAF6Q58WW2 860 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 HYIQ5T013 277 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 FKBP15Q5T1M5 1219 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 RAP1GAP2Q684P5 730 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 NANOGNBQ7Z5D8 188 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 PIP4P1Q86T03 277 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 MARCH9Q86YJ5 346 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 MYO1HQ8N1T3 1032 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 CTNNBL1Q8WYA6 563 aaPredicted RBP7.79□□□□□ -1.16
GNE-205ENST00000539815 NACC2Q96BF6 587 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 HNRNPABQ99729 332 aaKnown RBP7.79□□□□□ -1.16
GNE-205ENST00000539815 EFHD1Q9BUP0 239 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 CAPS2Q9BXY5 557 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 CPEB1Q9BZB8 566 aaKnown RBP7.79□□□□□ -1.16
GNE-205ENST00000539815 PABPC3Q9H361 631 aaKnown RBP7.79□□□□□ -1.16
GNE-205ENST00000539815 CCDC187A0A096LP49 1063 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 A0A1W2PQU0 124 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 RNF8O76064 485 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 VDRP11473 427 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 HNRNPLP14866 589 aaKnown RBP eCLIP7.79□□□□□ -1.161e-8■■■■□ 21.3
GNE-205ENST00000539815 EPHA8P29322 1005 aaPredicted RBP7.79□□□□□ -1.16
GNE-205ENST00000539815 CCR1P32246 355 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 KIF11P52732 1056 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 ZNF131P52739 623 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 MC1RQ01726 317 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms