RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 BRD8Q9H0E9 1235 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 CDH19Q9H159 772 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 GBA3Q9H227 469 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 SUDS3Q9H7L9 328 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-210ENST00000539599 RCOR3Q9P2K3 495 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-210ENST00000539599 ZNF212Q9UDV6 495 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 TLL2Q9Y6L7 1015 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 HHLA1C9JL84 531 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 BUD23O43709 281 aaKnown RBP14.32□□□□□ -0.12
UBE3B-210ENST00000539599 SCNN1AP37088 669 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 HARS2P49590 506 aaKnown RBP14.32□□□□□ -0.12
UBE3B-210ENST00000539599 TBL3Q12788 808 aaKnown RBP14.32□□□□□ -0.12
UBE3B-210ENST00000539599 OR52E8Q6IFG1 317 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 USP50Q70EL3 339 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-210ENST00000539599 CYS1Q717R9 158 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 ZSCAN18Q8TBC5 510 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-210ENST00000539599 CATSPER2Q96P56 530 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 RTP3Q9BQQ7 232 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 FAM124BQ9H5Z6 455 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-210ENST00000539599 ZDHHC2Q9UIJ5 367 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 ST3GAL5Q9UNP4 418 aa14.32□□□□□ -0.12
UBE3B-210ENST00000539599 C9IYK1 514 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 RNASEH1O60930 286 aaKnown RBP14.31□□□□□ -0.12
UBE3B-210ENST00000539599 PMPCBO75439 489 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 VAPBO95292 243 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 AHSGP02765 367 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 OR4Q2P0C623 313 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 ZNF865P0CJ78 1059 aaPredicted RBP14.31□□□□□ -0.12
UBE3B-210ENST00000539599 SERPINB6P35237 376 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 GRIA4P48058 902 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 PKNOX1P55347 436 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 GJA9P57773 515 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 AP2B1P63010 937 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 ASPHQ12797 758 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 DLG1Q12959 904 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 USP10Q14694 798 aaKnown RBP14.31□□□□□ -0.12
UBE3B-210ENST00000539599 PCSK7Q16549 785 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 FAM156AQ8NDB6 213 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 APBB2Q92870 758 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 S100A14Q9HCY8 104 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 MPP6Q9NZW5 540 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 POMPQ9Y244 141 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 INPP5FQ9Y2H2 1132 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 PCDHB12Q9Y5F1 795 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 CFLARO15519 480 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 KIF1CO43896 1103 aaKnown RBP14.31□□□□□ -0.12
UBE3B-210ENST00000539599 PIGNO95427 931 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 COX4I1P13073 169 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 AQP4P55087 323 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 MRPS35P82673 323 aaKnown RBP14.31□□□□□ -0.12
UBE3B-210ENST00000539599 KLF10Q13118 480 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 ZNF789Q5FWF6 425 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 ARL13AQ5H913 290 aaPredicted RBP14.31□□□□□ -0.12
UBE3B-210ENST00000539599 C6orf163Q5TEZ5 329 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 NXNQ6DKJ4 435 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 ZNF467Q7Z7K2 595 aaPredicted RBP14.31□□□□□ -0.12
UBE3B-210ENST00000539599 LRRTM3Q86VH5 581 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 RNF135Q8IUD6 432 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 TMEM151AQ8N4L1 468 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 KCTD13Q8WZ19 329 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 NDNQ99608 321 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 ECSITQ9BQ95 431 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 ACE2Q9BYF1 805 aaPredicted RBP14.31□□□□□ -0.12
UBE3B-210ENST00000539599 RUVBL2Q9Y230 463 aaKnown RBP14.31□□□□□ -0.12
UBE3B-210ENST00000539599 CDY2AQ9Y6F7 541 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 MYLKQ15746 1914 aa14.31□□□□□ -0.12
UBE3B-210ENST00000539599 C17orf102A2RUQ5 167 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 HDCP19113 662 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 CXCR3P49682 368 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 NUDT2P50583 147 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 IRGCQ6NXR0 463 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 EPGNQ6UW88 154 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 CLEC14AQ86T13 490 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 SNX32Q86XE0 403 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 CCNYL1Q8N7R7 359 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 OR6Y1Q8NGX8 325 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 DNAJC28Q9NX36 388 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 ANGPTL2Q9UKU9 493 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 SSX2IPQ9Y2D8 614 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 ARL5CA6NH57 179 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 F8W8V4 182 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 LIN7AO14910 233 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-210ENST00000539599 XPOTO43592 962 aaKnown RBP14.3□□□□□ -0.12
UBE3B-210ENST00000539599 MT-CO1P00395 513 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 PGK1P00558 417 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 RAG1P15918 1043 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 TCN1P20061 433 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-210ENST00000539599 MAGEA12P43365 314 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 DSG1Q02413 1049 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 LSM12Q3MHD2 195 aaKnown RBP14.3□□□□□ -0.12
UBE3B-210ENST00000539599 CXCL17Q6UXB2 119 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 LDB1Q86U70 411 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-210ENST00000539599 CENPLQ8N0S6 344 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-210ENST00000539599 SH3RF2Q8TEC5 729 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 NXNL1Q96CM4 212 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 TEKT5Q96M29 485 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 FERMT1Q9BQL6 677 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 FICDQ9BVA6 458 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 AGO3Q9H9G7 860 aaKnown RBP14.3□□□□□ -0.12
UBE3B-210ENST00000539599 CYP4F12Q9HCS2 524 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms