RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 PHACTR1Q9C0D0 580 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 SLC39A8Q9C0K1 460 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZFATQ9P243 1243 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 CHMP2BQ9UQN3 213 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 SHROOM3Q8TF72 1996 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 A6NHS1 94 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 TYROBPO43914 113 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 CNTN5O94779 1100 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 CTSAP10619 480 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 PSMB4P28070 264 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 ELK3P41970 407 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 THEMIS2Q5TEJ8 643 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 HHATQ5VTY9 493 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 SNX30Q5VWJ9 437 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 DNAJB7Q7Z6W7 309 aaPredicted RBP17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 HERC6Q8IVU3 1022 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 TCEAL8Q8IYN2 117 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 PDZD8Q8NEN9 1154 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 NACA2Q9H009 215 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 FNIP2Q9P278 1114 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 DNMT3LQ9UJW3 386 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 LAMA3Q16787 3333 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 A0A1W2PPM1 405 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 COCHO43405 550 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 CBX6O95503 412 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 RASSF2P50749 326 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 RING1Q06587 406 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZBTB17Q13105 803 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 ALFQ53S48 1182 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 HECTD3Q5T447 861 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 FBXL22Q6P050 247 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZNF534Q76KX8 674 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 TFAP2DQ7Z6R9 452 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 PDCD7Q8N8D1 485 aaKnown RBP17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 RTL3Q8N8U3 475 aaKnown RBP17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 OVCA2Q8WZ82 227 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 IGSF8Q969P0 613 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 MRRFQ96E11 262 aaKnown RBP17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 BRD8Q9H0E9 1235 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 TRPM5Q9NZQ8 1165 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 KLHL8Q9P2G9 620 aaPredicted RBP17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 PSMC3IPQ9P2W1 217 aaPredicted RBP17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 SLC24A2Q9UI40 661 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 LRRC42Q9Y546 428 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 INSL5Q9Y5Q6 135 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 SLC4A7Q9Y6M7 1214 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 SNUPNO95149 360 aaKnown RBP17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 TPBGLP0DKB5 382 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 FDFT1P37268 417 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 PSRC1Q6PGN9 363 aaPredicted RBP17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 OTOAQ7RTW8 1153 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZSCAN18Q8TBC5 510 aaPredicted RBP17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 DPF3Q92784 378 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 MYEOVQ96EZ4 313 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 AGAP3Q96P47 875 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 NUDCD1Q96RS6 583 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 RAD9AQ99638 391 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 RNF38Q9H0F5 515 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 PPCSQ9HAB8 311 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 ALG13Q9NP73 1137 aaKnown RBP17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 TEX264Q9Y6I9 313 aa17.42■□□□□ 0.38
PCDHB17P-201ENST00000539533 CHD7Q9P2D1 2997 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 C2orf78A6NCI8 922 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 TRAFD1O14545 582 aaPredicted RBP17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZBTB24O43167 697 aaPredicted RBP17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 TGM5O43548 720 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 CXCL14O95715 111 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 TPSB2P20231 275 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 VEPH1Q14D04 833 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 RASA2Q15283 850 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 RBBP5Q15291 538 aaKnown RBP17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 TPSAB1Q15661 275 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 SPDYAQ5MJ70 313 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 TRIM68Q6AZZ1 485 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 NADSYN1Q6IA69 706 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 C3orf62Q6ZUJ4 267 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 TMC7Q7Z402 723 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 PALM2Q8IXS6 379 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZNF276Q8N554 614 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 MCUQ8NE86 351 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZNF75CPQ92670 426 aaPredicted RBP17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 ETAA1Q9NY74 926 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 PLXNA4Q9HCM2 1894 aa17.41■□□□□ 0.38
PCDHB17P-201ENST00000539533 ANKRD33BA6NCL7 494 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 TLL1O43897 1013 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 PIAS1O75925 651 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 TAF1BQ53T94 588 aaPredicted RBP17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 WASHC2DQ5SRD0 308 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 LVRNQ6Q4G3 990 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 LZTR1Q8N653 840 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 ENDOVQ8N8Q3 282 aaKnown RBP17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 TRMT2BQ96GJ1 504 aaKnown RBP17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 CDK5RAP1Q96SZ6 601 aaKnown RBP17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZYG11BQ9C0D3 744 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 NOL6Q9H6R4 1146 aaKnown RBP17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 GKN1Q9NS71 199 aa17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 HBS1LQ9Y450 684 aaKnown RBP17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.4■□□□□ 0.38
PCDHB17P-201ENST00000539533 JCHAINP01591 159 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms