RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 CBX4O00257 560 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 WNT9AO14904 365 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 SMAD6O43541 496 aaKnown RBP15.32■□□□□ 0.04
RAB40B-202ENST00000538809 CALB1P05937 261 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 CTSLP07711 333 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 IL9RQ01113 521 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 C1QBPQ07021 282 aaKnown RBP15.32■□□□□ 0.04
RAB40B-202ENST00000538809 CNTN1Q12860 1018 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 NR1I3Q14994 352 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 ST3GAL2Q16842 350 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 ACBD5Q5T8D3 534 aaPredicted RBP15.32■□□□□ 0.04
RAB40B-202ENST00000538809 C22orf39Q6P5X5 142 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 CCDC185Q8N715 623 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 C3orf20Q8ND61 904 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 FAM172AQ8WUF8 416 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 SPON2Q9BUD6 331 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 TNKS2Q9H2K2 1166 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 AASDHPPTQ9NRN7 309 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 PCDHB9Q9Y5E1 797 aa15.32■□□□□ 0.04
RAB40B-202ENST00000538809 IGF2RP11717 2491 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 TBC1D3DA0A087WVF3 549 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 TBC1D3IA0A087WXS9 549 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 TBC1D3EA0A087X179 549 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 TBC1D3KA0A087X1G2 549 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 TBC1D3FA6NER0 549 aaPredicted RBP15.31■□□□□ 0.04
RAB40B-202ENST00000538809 LRRC53A6NM62 1247 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 C10orf142B7Z368 130 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 TBC1D3LB9A6J9 549 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 FAM72CH0Y354 149 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 H0Y8X5 98 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 MCF2LO15068 1137 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 ALOX15BO15296 676 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 WNT1P04628 370 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 TBC1D3HP0C7X1 549 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 ZNF883P0CG24 379 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 KRT3P12035 628 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 GPD1P21695 349 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 MAT2AP31153 395 aaKnown RBP15.31■□□□□ 0.04
RAB40B-202ENST00000538809 RFC1P35251 1148 aaPredicted RBP15.31■□□□□ 0.04
RAB40B-202ENST00000538809 PBX1P40424 430 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 CTSKP43235 329 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 CCR5P51681 352 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 HDAC4P56524 1084 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 C21orf59P57076 290 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 RACK1P63244 317 aaKnown RBP15.31■□□□□ 0.04
RAB40B-202ENST00000538809 NRG1Q02297 640 aaPredicted RBP15.31■□□□□ 0.04
RAB40B-202ENST00000538809 TRIP6Q15654 476 aaKnown RBP15.31■□□□□ 0.04
RAB40B-202ENST00000538809 FILIP1LQ4L180 1135 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 PPP1R15BQ5SWA1 713 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 FAM72AQ5TYM5 149 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 MANEALQ5VSG8 457 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 AGBL4Q5VU57 503 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 FAM46CQ5VWP2 391 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 TBC1D3GQ6DHY5 549 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 TBC1D3CQ6IPX1 549 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 FAM72DQ6L9T8 149 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 RWDD4Q6NW29 188 aaKnown RBP15.31■□□□□ 0.04
RAB40B-202ENST00000538809 DNAJC24Q6P3W2 148 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 STRADAQ7RTN6 431 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 LUZP1Q86V48 1076 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 FAM72BQ86X60 149 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 TBC1D3Q8IZP1 549 aaPredicted RBP15.31■□□□□ 0.04
RAB40B-202ENST00000538809 CHST14Q8NCH0 376 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 GRIN3AQ8TCU5 1115 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 ACE2Q9BYF1 805 aaPredicted RBP15.31■□□□□ 0.04
RAB40B-202ENST00000538809 ATP13A1Q9HD20 1204 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 NDFIP2Q9NV92 336 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 OR12D3Q9UGF7 316 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 KLK13Q9UKR3 277 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 PCOLCE2Q9UKZ9 415 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 PPM1HQ9ULR3 514 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 NEU3Q9UQ49 428 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 BTBD3Q9Y2F9 522 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 ACTL7AQ9Y615 435 aa15.31■□□□□ 0.04
RAB40B-202ENST00000538809 COL5A1P20908 1838 aaPredicted RBP15.31■□□□□ 0.04
RAB40B-202ENST00000538809 ILVBLA1L0T0 632 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 SIGLEC16A6NMB1 481 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 C1QTNF9BB2RNN3 333 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 RNF103O00237 685 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 KPNA3O00505 521 aaPredicted RBP15.3■□□□□ 0.04
RAB40B-202ENST00000538809 CCP110O43303 1012 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 PLRG1O43660 514 aaKnown RBP15.3■□□□□ 0.04
RAB40B-202ENST00000538809 CBFA2T3O75081 653 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 CCDC172P0C7W6 258 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 FTH1P19P0C7X4 201 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 C1QTNF9P0C862 333 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 PTMSP20962 102 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 ADRA1BP35368 520 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 PRKCIP41743 596 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 ARF5P84085 180 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 GNA12Q03113 381 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 HNRNPDQ14103 355 aaKnown RBP15.3■□□□□ 0.04
RAB40B-202ENST00000538809 MYLKQ15746 1914 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 ARL13BQ3SXY8 428 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 ACAD10Q6JQN1 1059 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 WDR59Q6PJI9 974 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 MCOLN2Q8IZK6 566 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 CHCHD4Q8N4Q1 142 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 PNPLA1Q8N8W4 532 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 ARID1BQ8NFD5 2236 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms