RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 ZCCHC11Q5TAX3 1644 aaKnown RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 FAM237BA0A1B0GVD1 139 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 G3V2T6 193 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 HDAC3O15379 428 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 SEC22BO75396 215 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 AKAP3O75969 853 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 LTKP29376 864 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 SLC26A2P50443 739 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 SLC25A3Q00325 362 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 KIAA0895Q8NCT3 520 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 FCGR1BQ92637 280 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 ACSF2Q96CM8 615 aaPredicted RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 C7orf26Q96N11 449 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 TRMOQ9BU70 441 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 YTHDF1Q9BYJ9 559 aaKnown RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 TRMT13Q9NUP7 481 aaKnown RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 SNX6Q9UNH7 406 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 IRAK3Q9Y616 596 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 ITSN1Q15811 1721 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 NCF1BA6NI72 391 aaPredicted RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 NCF1CA8MVU1 366 aaPredicted RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 GNB5O14775 395 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 NOS1APO75052 506 aaPredicted RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 LRIG2O94898 1065 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 NADKO95544 446 aaPredicted RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 NCF1P14598 390 aaPredicted RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 CYP2C18P33260 490 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 HALP42357 657 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 PTPN11Q06124 597 aaPredicted RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 PCID2Q5JVF3 399 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 ANGEL2Q5VTE6 544 aaKnown RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 METTL21CQ5VZV1 264 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 RASSF6Q6ZTQ3 369 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 B3GALNT2Q8NCR0 500 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 OR52L1Q8NGH7 329 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 SPIRE2Q8WWL2 714 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 SLC47A1Q96FL8 570 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 TDRD3Q9H7E2 651 aaKnown RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 RAD18Q9NS91 495 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 ZNF180Q9UJW8 692 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 SHBGP04278 402 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 HOXC6P09630 235 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 YWHAQP27348 245 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 PTGS2P35354 604 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 CLCN2P51788 898 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 PKNOX1P55347 436 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 USP46P62068 366 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 YWHAZP63104 245 aaKnown RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 AMPD2Q01433 879 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 MKRN4PQ13434 485 aaPredicted RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 LCN1P1Q5VSP4 162 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 EFCAB12Q6NXP0 572 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 PJA1Q8NG27 643 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 STAG3L4Q8TBR4 150 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 ZFAND2BQ8WV99 257 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 UBE2E3Q969T4 207 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 TEFMQ96QE5 360 aaKnown RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 CRAMP1Q96RY5 1269 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 DUSP9Q99956 384 aaKnown RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 HGH1Q9BTY7 390 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 ACSS3Q9H6R3 686 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 CISHQ9NSE2 258 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 CMTM6Q9NX76 183 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 IFT80Q9P2H3 777 aaPredicted RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 FAM205AQ6ZU69 1335 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 CLDN25C9JDP6 229 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 RPN2P04844 631 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 DARSP14868 501 aaKnown RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 GPR15P49685 360 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 PWP1Q13610 501 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 HKDC1Q2TB90 917 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 MTX3Q5HYI7 312 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 STRIP1Q5VSL9 837 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 HIPK1Q86Z02 1210 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 C12orf56Q8IXR9 622 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 SVOPLQ8N434 492 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 TTLL6Q8N841 843 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 MAB21L3Q8N8X9 362 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 GMCL1P1Q8NEA9 526 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 RHOBTB2Q9BYZ6 727 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 STOX2Q9P2F5 926 aaPredicted RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 MKLN1Q9UL63 735 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 DNPEPQ9ULA0 475 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 BARX2Q9UMQ3 279 aaPredicted RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 TMED5Q9Y3A6 229 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 DPPA5A6NC42 116 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 RBAK-RBAKDNI3L0D1 243 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 CST1P01037 141 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 NFICP08651 508 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 NOS3P29474 1203 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 RFX5P48382 616 aaPredicted RBP7.01□□□□□ -1.29
SORT1-209ENST00000538502 ARL4DP49703 201 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 MMP14P50281 582 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 CDH18Q13634 790 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 PAGE2BQ5JRK9 111 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 FGD3Q5JSP0 725 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 TRIM74Q86UV6 250 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 TRIM73Q86UV7 250 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 YAF2Q8IY57 180 aa7.01□□□□□ -1.29
SORT1-209ENST00000538502 FAM13CQ8NE31 585 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms