RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 IRX1P78414 480 aaPredicted RBP10.96□□□□□ -0.65
CLIP1-210ENST00000538120 SARNPP82979 210 aaKnown RBP10.96□□□□□ -0.65
CLIP1-210ENST00000538120 PPP2R5DQ14738 602 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 ARHGAP36Q6ZRI8 547 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 CYS1Q717R9 158 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 CLNKQ7Z7G1 428 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 C14orf80Q86SX3 495 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 LRRC6Q86X45 466 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 CTAGE3PQ8IX95 158 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 ENDOVQ8N8Q3 282 aaKnown RBP10.96□□□□□ -0.65
CLIP1-210ENST00000538120 ANKK1Q8NFD2 765 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 TCP10LQ8TDR4 215 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 SEPT8Q92599 483 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 PTPRN2Q92932 1015 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 MLPHQ9BV36 600 aaPredicted RBP10.96□□□□□ -0.65
CLIP1-210ENST00000538120 SEZ6LQ9BYH1 1024 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 CRISPLD1Q9H336 500 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 PIF1Q9H611 641 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 PAK6Q9NQU5 681 aaPredicted RBP10.96□□□□□ -0.65
CLIP1-210ENST00000538120 SLC17A7Q9P2U7 560 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 PCDHB5Q9Y5E4 795 aa10.96□□□□□ -0.65
CLIP1-210ENST00000538120 KLHL33A6NCF5 533 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 C2orf71A6NGG8 1288 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 SOAT2O75908 522 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 ZWINTO95229 277 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 LUC7L3O95232 432 aaKnown RBP10.96□□□□□ -0.66
CLIP1-210ENST00000538120 RECKO95980 971 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 ALDH2P05091 517 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 CCR1P32246 355 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 NEK3P51956 506 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 SESN2P58004 480 aaPredicted RBP10.96□□□□□ -0.66
CLIP1-210ENST00000538120 ARHGEF6Q15052 776 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 TEX44Q53QW1 395 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 TTC39BQ5VTQ0 682 aaPredicted RBP10.96□□□□□ -0.66
CLIP1-210ENST00000538120 KCTD11Q693B1 232 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 TAS1R1Q7RTX1 841 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 MON1AQ86VX9 555 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 TMEM173Q86WV6 379 aaPredicted RBP10.96□□□□□ -0.66
CLIP1-210ENST00000538120 ABI1Q8IZP0 508 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 GPR152Q8TDT2 470 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 BCL7CQ8WUZ0 217 aaPredicted RBP10.96□□□□□ -0.66
CLIP1-210ENST00000538120 ALKBH8Q96BT7 664 aaKnown RBP10.96□□□□□ -0.66
CLIP1-210ENST00000538120 SLC39A13Q96H72 371 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 SCLYQ96I15 445 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 FCRL2Q96LA5 508 aaPredicted RBP10.96□□□□□ -0.66
CLIP1-210ENST00000538120 FERMT1Q9BQL6 677 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 CADM1Q9BY67 442 aaKnown RBP10.96□□□□□ -0.66
CLIP1-210ENST00000538120 SYBUQ9NX95 663 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 GMIPQ9P107 970 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 VWA8A3KMH1 1905 aa10.96□□□□□ -0.66
CLIP1-210ENST00000538120 A0A0G2JND7 137 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 FAM92AA1XBS5 289 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 OR6C75A6NL08 312 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 TRIM49D1C9J1S8 452 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 NT5C1B-RDH14C9J2C7 533 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 ZNF189O75820 626 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-210ENST00000538120 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-210ENST00000538120 GALTP07902 379 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 PTPN4P29074 926 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 SERPINB6P35237 376 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 PBX3P40426 434 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 RWDD4Q6NW29 188 aaKnown RBP10.95□□□□□ -0.66
CLIP1-210ENST00000538120 MSANTD2Q6P1R3 559 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.95□□□□□ -0.66
CLIP1-210ENST00000538120 CNTD1Q8N815 330 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 UCMAQ8WVF2 138 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 LRCH3Q96II8 777 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 AGAP3Q96P47 875 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 GBA3Q9H227 469 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 FBXO6Q9NRD1 293 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-210ENST00000538120 NDFIP2Q9NV92 336 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 ARL8BQ9NVJ2 186 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 HS3ST4Q9Y661 456 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 MRPL42Q9Y6G3 142 aaKnown RBP10.95□□□□□ -0.66
CLIP1-210ENST00000538120 IKBKGQ9Y6K9 419 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 C2CD2LO14523 706 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 TRAFD1O14545 582 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-210ENST00000538120 RFPL1O75677 317 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 AP2A1O95782 977 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 ETV4P43268 484 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 NIPAL4Q0D2K0 466 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 RTP2Q5QGT7 225 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 FUT10Q6P4F1 479 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 NPAS4Q8IUM7 802 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 OR52K1Q8NGK4 314 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 NRG4Q8WWG1 115 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 TEKT5Q96M29 485 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 DEFB118Q96PH6 123 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 TSGA13Q96PP4 275 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 PIDD1Q9HB75 910 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 NMRK1Q9NWW6 199 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 TRHDEQ9UKU6 1024 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 SLC27A5Q9Y2P5 690 aa10.95□□□□□ -0.66
CLIP1-210ENST00000538120 MTMR11A4FU01 709 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 TM9SF1O15321 606 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 MTSS1O43312 755 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 CACNG3O60359 315 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 PQBP1O60828 265 aaKnown RBP10.94□□□□□ -0.66
CLIP1-210ENST00000538120 USP12O75317 370 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 KRT36O76013 467 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms