RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 GABRR2P28476 465 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 NR2C2P49116 596 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 FLT3LGP49771 235 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TBC1D3GQ6DHY5 549 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TBC1D3CQ6IPX1 549 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TBC1D3Q8IZP1 549 aaPredicted RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TMEM132CQ8N3T6 1108 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 ACO2Q99798 780 aaKnown RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TMEM79Q9BSE2 394 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 VPS45Q9NRW7 570 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TUBGCP4Q9UGJ1 667 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 COPG1Q9Y678 874 aaKnown RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 A0A087X1B8 175 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 ZNF839A8K0R7 811 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 PSMD8P48556 350 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 MMP14P50281 582 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 RABGGTBP53611 331 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 DEFA1P59665 94 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 DEFA3P59666 94 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 PKN2Q16513 984 aaKnown RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 CCDC153Q494R4 210 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 PABPC1LQ4VXU2 614 aaKnown RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 SLC45A4Q5BKX6 768 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 FAM151BQ6UXP7 276 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 MAP4K3Q8IVH8 894 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 CERS5Q8N5B7 392 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 RNASE11Q8TAA1 199 aaKnown RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 RELTQ969Z4 430 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 RERGQ96A58 199 aaPredicted RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 PANX3Q96QZ0 392 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 FAM126AQ9BYI3 521 aaPredicted RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 AVENQ9NQS1 362 aaPredicted RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TBC1D23Q9NUY8 699 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 BTRCQ9Y297 605 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 NDUFAF1Q9Y375 327 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 PCDHA3Q9Y5H8 950 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 MST1RQ04912 1400 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 C1orf232A0A0U1RR37 186 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 SLC15A5A6NIM6 579 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TMEM88BA6NKF7 163 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 ISM1B1AKI9 464 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TBC1D12O60347 775 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 PAEPP09466 180 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 FGRP09769 529 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 DPYSL3Q14195 570 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 FAAH2Q6GMR7 532 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 ELOA2Q8IYF1 753 aaPredicted RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 SNRNP27Q8WVK2 155 aaKnown RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 ABCG4Q9H172 646 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 ARMCX1Q9P291 453 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TNFSF13BQ9Y275 285 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 DDX3XO00571 662 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 MSI1O43347 362 aaKnown RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TCEA1P23193 301 aaKnown RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 NTSP30990 170 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 MCL1Q07820 350 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 OASLQ15646 514 aaKnown RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 MIIPQ5JXC2 388 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 WDR59Q6PJI9 974 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 KDM7AQ6ZMT4 941 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 FAM20CQ8IXL6 584 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TCF7L2Q9NQB0 619 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 CHST7Q9NS84 486 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 TRHDEQ9UKU6 1024 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 DNALI1O14645 258 aaPredicted RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 PDE5AO76074 875 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 ADH1AP07327 375 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 NQO1P15559 274 aaKnown RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 HDAC7Q8WUI4 952 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 C18orf25Q96B23 403 aaPredicted RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 RNF145Q96MT1 663 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 NXF3Q9H4D5 531 aaKnown RBP11.35□□□□□ -0.59
LINC00346-201ENST00000538077 NINJ2Q9NZG7 142 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 CD84Q9UIB8 345 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 HPSEQ9Y251 543 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 PCDHA11Q9Y5I1 949 aa11.35□□□□□ -0.59
LINC00346-201ENST00000538077 RGPD8O14715 1765 aaPredicted RBP11.34□□□□□ -0.59
LINC00346-201ENST00000538077 BCL9O00512 1426 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 IQCMA0A1B0GVH7 501 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 A0A1W2PQH9 124 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 LRRC14BA6NHZ5 514 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 C1QTNF3-AMACRE9PGA6 284 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 NTRK1P04629 796 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 DGKAP23743 735 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 KDELR1P24390 212 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 CAPSQ13938 189 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 GPR158Q5T848 1215 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 AGMOQ6ZNB7 445 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 ZNF655Q8N720 491 aaPredicted RBP11.34□□□□□ -0.59
LINC00346-201ENST00000538077 SCAIQ8N9R8 606 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 RRN3Q9NYV6 651 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 ZNF541Q9H0D2 1346 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 MDM4O15151 490 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 TRUB2O95900 331 aaKnown RBP11.34□□□□□ -0.59
LINC00346-201ENST00000538077 POLD2P49005 469 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 CNPY4Q8N129 248 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 MTMR8Q96EF0 704 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 IDI2Q9BXS1 227 aa11.34□□□□□ -0.59
LINC00346-201ENST00000538077 TLE6Q9H808 572 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms