RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 MAPK8IP2Q13387 824 aaPredicted RBP11.44□□□□□ -0.58
CLPB-208ENST00000538021 SERINC3Q13530 473 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 CLCA4Q14CN2 919 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 IGFBP7Q16270 282 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 SKIDA1Q1XH10 827 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 PMF1Q6P1K2 205 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 CIR1Q86X95 450 aaPredicted RBP11.44□□□□□ -0.58
CLPB-208ENST00000538021 FAM186BQ8IYM0 893 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 SCML4Q8N228 414 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 WDR48Q8TAF3 677 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 FAM174AQ8TBP5 190 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 ERCC4Q92889 916 aaPredicted RBP11.44□□□□□ -0.58
CLPB-208ENST00000538021 GLMNQ92990 594 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 NAT6Q93015 286 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 FAXDC2Q96IV6 333 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 PPP1R13BQ96KQ4 1090 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 BMFQ96LC9 184 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 MIS12Q9H081 205 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 EPN3Q9H201 632 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 GEMIN8Q9NWZ8 242 aaKnown RBP11.44□□□□□ -0.58
CLPB-208ENST00000538021 RAB20Q9NX57 234 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 SEPT10Q9P0V9 454 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 KLF15Q9UIH9 416 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 ZFR2Q9UPR6 939 aaKnown RBP11.44□□□□□ -0.58
CLPB-208ENST00000538021 MAN2B2Q9Y2E5 1009 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 PCDHGA4Q9Y5G9 962 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 HS3ST3A1Q9Y663 406 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 NOTCH2Q04721 2471 aa11.44□□□□□ -0.58
CLPB-208ENST00000538021 UTP20O75691 2785 aaKnown RBP11.44□□□□□ -0.58
CLPB-208ENST00000538021 SPTY2D1-AS1A0A0U1RR47 76 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 POM121BA6NF01 834 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 F5H5T6 163 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 O00370 1275 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 TPP1O14773 563 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 MAPK13O15264 365 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 ATP9BO43861 1147 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 KLRC4O43908 158 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 CUTAO60888 179 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 PPP6R2O75170 966 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 PAK4O96013 591 aaPredicted RBP11.43□□□□□ -0.58
CLPB-208ENST00000538021 CTSLP07711 333 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 JMJD7P0C870 316 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 VDRP11473 427 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 MXI1P50539 228 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 EIF3IQ13347 325 aaKnown RBP11.43□□□□□ -0.58
CLPB-208ENST00000538021 C1orf61Q13536 156 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 PDE1CQ14123 709 aaPredicted RBP11.43□□□□□ -0.58
CLPB-208ENST00000538021 KYAT3Q6YP21 454 aaKnown RBP11.43□□□□□ -0.58
CLPB-208ENST00000538021 B3GNT8Q7Z7M8 397 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 SLC35F3Q8IY50 421 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 CCAR2Q8N163 923 aaKnown RBP11.43□□□□□ -0.58
CLPB-208ENST00000538021 FBXL13Q8NEE6 735 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 ZNF564Q8TBZ8 553 aaPredicted RBP11.43□□□□□ -0.58
CLPB-208ENST00000538021 FAM149B1Q96BN6 582 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 EEF2KMTQ96G04 330 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 LIN37Q96GY3 246 aaPredicted RBP11.43□□□□□ -0.58
CLPB-208ENST00000538021 SLC39A13Q96H72 371 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 FOXP3Q9BZS1 431 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 STRADBQ9C0K7 418 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 PISDQ9UG56 409 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 NAALADL1Q9UQQ1 740 aa11.43□□□□□ -0.58
CLPB-208ENST00000538021 FARP1Q9Y4F1 1045 aaPredicted RBP11.43□□□□□ -0.58
CLPB-208ENST00000538021 BLACEA4D250 179 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 GABBR2O75899 941 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 FYNP06241 537 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 CHRNA3P32297 505 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 GTF2H1P32780 548 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 PSMC2P35998 433 aaKnown RBP11.42□□□□□ -0.58
CLPB-208ENST00000538021 RABIFP47224 123 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 PLK1P53350 603 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 ADKP55263 362 aaKnown RBP11.42□□□□□ -0.58
CLPB-208ENST00000538021 FOXK1P85037 733 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 NNTQ13423 1086 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 ZC3H12AQ5D1E8 599 aaKnown RBP11.42□□□□□ -0.58
CLPB-208ENST00000538021 ERN2Q76MJ5 926 aaKnown RBP11.42□□□□□ -0.58
CLPB-208ENST00000538021 TAC4Q86UU9 113 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 CEP57L1Q8IYX8 460 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 FAM26EQ8N5C1 309 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 SLC35F5Q8WV83 523 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 HTR3CQ8WXA8 447 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 PPP1R9BQ96SB3 815 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 BOCQ9BWV1 1114 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 SLC17A9Q9BYT1 436 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 ZSCAN16Q9H4T2 348 aaPredicted RBP11.42□□□□□ -0.58
CLPB-208ENST00000538021 GPR27Q9NS67 375 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 SPASTQ9UBP0 616 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 VPS28Q9UK41 221 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 PADI4Q9UM07 663 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 TRAF3IP3Q9Y228 551 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 PCDHB11Q9Y5F2 797 aa11.42□□□□□ -0.58
CLPB-208ENST00000538021 SPENQ96T58 3664 aaKnown RBP11.42□□□□□ -0.58
CLPB-208ENST00000538021 TMX2-CTNND1H3BSU7 103 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 M0QYV0 167 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 NTN3O00634 580 aaPredicted RBP11.41□□□□□ -0.58
CLPB-208ENST00000538021 RAD51BO15315 384 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 SPINT1O43278 529 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 GCATO75600 419 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 FBXO21O94952 628 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 ANXA6P08133 673 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 WT1P19544 449 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms