RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 NEU3Q9UQ49 428 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 DNAJC16Q9Y2G8 782 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 MYLKQ15746 1914 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 MSI1O43347 362 aaKnown RBP13.11□□□□□ -0.31
TRIM25-202ENST00000537230 SORBS2O94875 1100 aaKnown RBP13.11□□□□□ -0.31
TRIM25-202ENST00000537230 RTN3O95197 1032 aaPredicted RBP13.11□□□□□ -0.31
TRIM25-202ENST00000537230 PROCP04070 461 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 MGAT3Q09327 533 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 GALNT2Q10471 571 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 ANKRD20A4Q4UJ75 823 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 RASIP1Q5U651 963 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 RWDD4Q6NW29 188 aaKnown RBP13.11□□□□□ -0.31
TRIM25-202ENST00000537230 IFNL1Q8IU54 200 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 TRIM42Q8IWZ5 723 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 PPP1R14CQ8TAE6 165 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 ATP2A3Q93084 1043 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 HDAC11Q96DB2 347 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 NR1H4Q96RI1 486 aaPredicted RBP13.11□□□□□ -0.31
TRIM25-202ENST00000537230 GBA3Q9H227 469 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 EBF3Q9H4W6 596 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 CASS4Q9NQ75 786 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 PNPOQ9NVS9 261 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 THAP1Q9NVV9 213 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 GABRQQ9UN88 632 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 PTCH2Q9Y6C5 1203 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 NLRC5Q86WI3 1866 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 ARHGAP42A6NI28 874 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 B4GALT3O60512 393 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 GLRA3O75311 464 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 GSTT1P30711 240 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 GP5P40197 560 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 DNAL1Q4LDG9 190 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 VWA5B1Q5TIE3 1220 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRIM25-202ENST00000537230 RNF34Q969K3 372 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 ZIC5Q96T25 663 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 SORT1Q99523 831 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 SHCBP1LQ9BZQ2 653 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 TXNDC16Q9P2K2 825 aa13.11□□□□□ -0.31
TRIM25-202ENST00000537230 A0A088AWK7 358 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 MT-CYBP00156 380 aaPredicted RBP13.1□□□□□ -0.31
TRIM25-202ENST00000537230 OR4Q2P0C623 313 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 NMBRP28336 390 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 CRABP2P29373 138 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 CPOXP36551 454 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 SLC1A6P48664 564 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 HCAR3P49019 387 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 TUBB3Q13509 450 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 PPP2R5DQ14738 602 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 ARL13BQ3SXY8 428 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 FAM171BQ6P995 826 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 RNF111Q6ZNA4 994 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 ACMSDQ8TDX5 336 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 RBBP8Q99708 897 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 NAT9Q9BTE0 207 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 LRRC40Q9H9A6 602 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 PRDM16Q9HAZ2 1276 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 BFARQ9NZS9 450 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 SFMBT1Q9UHJ3 866 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 GIT1Q9Y2X7 761 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 BUD23O43709 281 aaKnown RBP13.1□□□□□ -0.31
TRIM25-202ENST00000537230 SERPINA6P08185 405 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 FAM163BP0C2L3 166 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 CYBAP13498 195 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 PCSK1P29120 753 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 AIF1P55008 147 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 CAP1Q01518 475 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 ITGA9Q13797 1035 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 RALGPS1Q5JS13 557 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 INTS6LQ5JSJ4 861 aaKnown RBP13.1□□□□□ -0.31
TRIM25-202ENST00000537230 SPANXN3Q5MJ09 141 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 PM20D1Q6GTS8 502 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 TEKT5Q96M29 485 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 PKMYT1Q99640 499 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 EPAS1Q99814 870 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 COPG2Q9UBF2 871 aa13.1□□□□□ -0.31
TRIM25-202ENST00000537230 DFFAO00273 331 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 EPHB1P54762 984 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 CFAP157Q5JU67 520 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 ARTNQ5T4W7 220 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 NAPRTQ6XQN6 538 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 PDZD4Q76G19 769 aaPredicted RBP13.09□□□□□ -0.31
TRIM25-202ENST00000537230 PIWIL2Q8TC59 973 aaKnown RBP13.09□□□□□ -0.31
TRIM25-202ENST00000537230 CCDC124Q96CT7 223 aaKnown RBP13.09□□□□□ -0.31
TRIM25-202ENST00000537230 CPNE1Q99829 537 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 NMRK2Q9NPI5 230 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 SOX13Q9UN79 622 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 NYNRINQ9P2P1 1898 aaKnown RBP13.09□□□□□ -0.31
TRIM25-202ENST00000537230 ODC1P11926 461 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 ETS2P15036 469 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 RPS6KA3P51812 740 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 ITGA7Q13683 1181 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 CNPY1Q3B7I2 92 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 LPCAT4Q643R3 524 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 MRPL10Q7Z7H8 261 aaKnown RBP13.09□□□□□ -0.31
TRIM25-202ENST00000537230 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 HIPK4Q8NE63 616 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 SOCS4Q8WXH5 440 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 ADAM2Q99965 735 aa13.09□□□□□ -0.31
TRIM25-202ENST00000537230 ACBD6Q9BR61 282 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms