RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 KCNMA1Q12791 1236 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 ARL13BQ3SXY8 428 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 ALFQ53S48 1182 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 KCNT1Q5JUK3 1230 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 AGBL4Q5VU57 503 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 NAA35Q5VZE5 725 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 DPY19L2P1Q6NXN4 242 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 NEK5Q6P3R8 708 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 TRIM72Q6ZMU5 477 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 TFAP2DQ7Z6R9 452 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 OR52K2Q8NGK3 314 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 ENOX1Q8TC92 643 aaKnown RBP13.44□□□□□ -0.26
RTN3-207ENST00000536011 ZYG11BQ9C0D3 744 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 RETREG1Q9H6L5 497 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 EBF2Q9HAK2 575 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 TAB2Q9NYJ8 693 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 SARDHQ9UL12 918 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 PCDHGA1Q9Y5H4 931 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 TP53BP1Q12888 1972 aaPredicted RBP13.43□□□□□ -0.26
RTN3-207ENST00000536011 ATMINO43313 823 aaPredicted RBP13.43□□□□□ -0.26
RTN3-207ENST00000536011 LDOC1O95751 146 aaPredicted RBP13.43□□□□□ -0.26
RTN3-207ENST00000536011 WNT1P04628 370 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 MMEP08473 750 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 C1SP09871 688 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 TFE3P19532 575 aaPredicted RBP13.43□□□□□ -0.26
RTN3-207ENST00000536011 EPHA8P29322 1005 aaPredicted RBP13.43□□□□□ -0.26
RTN3-207ENST00000536011 MAT2AP31153 395 aaKnown RBP13.43□□□□□ -0.26
RTN3-207ENST00000536011 CHRNA3P32297 505 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 HNF1BP35680 557 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 FLT3P36888 993 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 CDR2Q01850 454 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 SLC20A2Q08357 652 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 POM121L1PQ3SYA9 428 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 CCDC157Q569K6 752 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 CLEC17AQ6ZS10 378 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 ZNF683Q8IZ20 524 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 TMIEQ8NEW7 156 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 SAP25Q8TEE9 199 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 CPA5Q8WXQ8 436 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 CEP44Q9C0F1 390 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 TMEM59LQ9UK28 342 aa13.43□□□□□ -0.26
RTN3-207ENST00000536011 CXorf51AA0A1B0GTR3 108 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 CBX4O00257 560 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 ENC1O14682 589 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 SNAP91O60641 907 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 SRGAP2O75044 1071 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 GFPT2O94808 682 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 MMP8P22894 467 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 RRM1P23921 792 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 SDC4P31431 198 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 SOX5P35711 763 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 RXRGP48443 463 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 METAP1P53582 386 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 GEMIN4P57678 1058 aaKnown RBP13.42□□□□□ -0.26
RTN3-207ENST00000536011 POLR2FP61218 127 aaKnown RBP13.42□□□□□ -0.26
RTN3-207ENST00000536011 SYCP1Q15431 976 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 SMAD1Q15797 465 aaKnown RBP13.42□□□□□ -0.26
RTN3-207ENST00000536011 CDKAL1Q5VV42 579 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 C22orf39Q6P5X5 142 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 ZSCAN30Q86W11 494 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 FAM131BQ86XD5 332 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 GATAD2AQ86YP4 633 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 PCDH20Q8N6Y1 951 aaKnown RBP13.42□□□□□ -0.26
RTN3-207ENST00000536011 OR2A12Q8NGT7 310 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 CNDP2Q96KP4 475 aaKnown RBP13.42□□□□□ -0.26
RTN3-207ENST00000536011 CFAP57Q96MR6 1250 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 GBP4Q96PP9 640 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 PSMB7Q99436 277 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 SPON2Q9BUD6 331 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 VPS16Q9H269 839 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 GANQ9H2C0 597 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 ATP13A1Q9HD20 1204 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 ANLNQ9NQW6 1124 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 METTL5Q9NRN9 209 aaKnown RBP13.42□□□□□ -0.26
RTN3-207ENST00000536011 FAM207AQ9NSI2 230 aaPredicted RBP13.42□□□□□ -0.26
RTN3-207ENST00000536011 MPP6Q9NZW5 540 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 ARHGAP20Q9P2F6 1191 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 PPARGC1AQ9UBK2 798 aaKnown RBP13.42□□□□□ -0.26
RTN3-207ENST00000536011 IL36AQ9UHA7 158 aa13.42□□□□□ -0.26
RTN3-207ENST00000536011 NOCTQ9UK39 431 aaKnown RBP13.42□□□□□ -0.26
RTN3-207ENST00000536011 ZFYVE26Q68DK2 2539 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 A0A0D9SEW6 157 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 GOLGA6L22H0YM25 854 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 I6L893 689 aaPredicted RBP13.41□□□□□ -0.26
RTN3-207ENST00000536011 PLK4O00444 970 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 RFPL3O75679 317 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 MT-CO1P00395 513 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 AKT2P31751 481 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 STAT1P42224 750 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 NSFP46459 744 aaKnown RBP13.41□□□□□ -0.26
RTN3-207ENST00000536011 SERPINH1P50454 418 aaKnown RBP13.41□□□□□ -0.26
RTN3-207ENST00000536011 ATP11AP98196 1134 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 ILKQ13418 452 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 KRT31Q15323 416 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 HS1BP3Q53T59 392 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 PIP5KL1Q5T9C9 394 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 LINGO4Q6UY18 593 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 BNIPLQ7Z465 357 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 TMPRSS12Q86WS5 348 aa13.41□□□□□ -0.26
RTN3-207ENST00000536011 FAM174AQ8TBP5 190 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms