RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SLC39A10Q9ULF5 831 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 RAP2CQ9Y3L5 183 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 E9PBE3 544 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 KLHL41O60662 606 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 CABYRO75952 493 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 THP07101 528 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 COL6A2P12110 1019 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 NMBRP28336 390 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 RPL14P50914 215 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 CDC16Q13042 620 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 CCNIQ14094 377 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 LIPMQ5VYY2 423 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 RAPH1Q70E73 1250 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 BHLHA9Q7RTU4 235 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 ZC3HC1Q86WB0 502 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 PPP2R3CQ969Q6 453 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 TSNARE1Q96NA8 513 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 TSGA13Q96PP4 275 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 APBA2Q99767 749 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 PPP1R12CQ9BZL4 782 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 CYP4F11Q9HBI6 524 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 CSNK1G1Q9HCP0 422 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 ZDHHC7Q9NXF8 308 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 CPSF2Q9P2I0 782 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 PDP2Q9P2J9 529 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 HDAC3O15379 428 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 ZNF865P0CJ78 1059 aaPredicted RBP16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 THRAP10827 490 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 POLD2P49005 469 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 MTTPP55157 894 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 TBL3Q12788 808 aaKnown RBP16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 CUL3Q13618 768 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 GRM3Q14832 879 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 UGP2Q16851 508 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 ZYG11AQ6WRX3 759 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 ACVR1CQ8NER5 493 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 SHKBP1Q8TBC3 707 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 MAPK15Q8TD08 544 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 EDEM1Q92611 657 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 IFT43Q96FT9 208 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 CNDP1Q96KN2 507 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 KATNAL1Q9BW62 490 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 C1QTNF1Q9BXJ1 281 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 OSBPL2Q9H1P3 480 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 TASP1Q9H6P5 420 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 UBP1Q9NZI7 540 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 MAGED2Q9UNF1 606 aaPredicted RBP16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 SSX2IPQ9Y2D8 614 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 TIMM13Q9Y5L4 95 aaPredicted RBP16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 SHROOM3Q8TF72 1996 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 DDHD2O94830 711 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 MYL3P08590 195 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 SRGAP2BP0DMP2 458 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 TFEBP19484 476 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 CCNCP24863 283 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 PCSK1P29120 753 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 ABCG1P45844 678 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 CLCNKBP51801 687 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 IRX1P78414 480 aaPredicted RBP16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 XIAPP98170 497 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 SLC12A1Q13621 1099 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 PCID2Q5JVF3 399 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 CNTD1Q8N815 330 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 STON2Q8WXE9 905 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 LENG8Q96PV6 779 aaPredicted RBP16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 OR52B2Q96RD2 323 aa16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.3■□□□□ 0.2
CHMP1A-202ENST00000535997 RGSL1A5PLK6 1076 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 SLCO1B7G3V0H7 640 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 SLC22A2O15244 555 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 SMIM24O75264 130 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 PDE5AO76074 875 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 F7P08709 466 aaPredicted RBP16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 HOXC8P31273 242 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 CYP2C18P33260 490 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 GRIA4P48058 902 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 USP10Q14694 798 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 TAF2Q6P1X5 1199 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 PKN3Q6P5Z2 889 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 RNF111Q6ZNA4 994 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 HPS6Q86YV9 775 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 SPATS2LQ9NUQ6 558 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 MEIS3P2A8K0S8 358 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 GOLGA8TH3BQL2 631 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 AHSGP02765 367 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 FESP07332 822 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 LYNP07948 512 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 ADSLP30566 484 aaPredicted RBP16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 RPL9P32969 192 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 PEX19P40855 299 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 PRKAA1Q13131 559 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 SEL1L3Q68CR1 1132 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 OTOP3Q7RTS5 596 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 KBTBD6Q86V97 674 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 PDSS2Q86YH6 399 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 CNTN4Q8IWV2 1026 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 SCML4Q8N228 414 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 RNF34Q969K3 372 aa16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 CCDC124Q96CT7 223 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-202ENST00000535997 GAD1Q99259 594 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms