RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ZNF578Q96N58 590 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 DUSP23Q9BVJ7 150 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SIK2Q9H0K1 926 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 FZD3Q9NPG1 666 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 KLHL11Q9NVR0 708 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 MAN1B1Q9UKM7 699 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CNTN6Q9UQ52 1028 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 A6NNZ2 444 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PAGE1O75459 146 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 DAB1O75553 588 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SRCP12931 536 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CD44P16070 742 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CHRNA3P32297 505 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 GGCXP38435 758 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CLCN6P51797 869 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 STX17P56962 302 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 HNRNPKP61978 463 aaKnown RBP eCLIP13.29□□□□□ -0.284e-8■■■□□ 15.2
TNFRSF1A-207ENST00000535958 GABREP78334 506 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 TLE3Q04726 772 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PAK1Q13153 545 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 TAF5Q15542 800 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ARHGAP44Q17R89 818 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PIP5KL1Q5T9C9 394 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 LRRC31Q6UY01 552 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 C11orf57Q6ZUT1 292 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ERICH1Q86X53 443 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 TMEM145Q8NBT3 493 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 FAM174AQ8TBP5 190 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 GRIN3AQ8TCU5 1115 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SLC2A13Q96QE2 648 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PDCL3Q9H2J4 239 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 USP29Q9HBJ7 922 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 DNAJC28Q9NX36 388 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 NLGN3Q9NZ94 848 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 STAP1Q9ULZ2 295 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 HS3ST2Q9Y278 367 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PCDHB1Q9Y5F3 818 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 HS3ST4Q9Y661 456 aa13.29□□□□□ -0.28
TNFRSF1A-207ENST00000535958 M0QYT0 321 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ERVH48-1M5A8F1 160 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 USP12O75317 370 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PIAS2O75928 621 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ADCY5O95622 1261 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 MPOP05164 745 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CKMT1AP12532 417 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 NOS2P35228 1153 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 KRT9P35527 623 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CFHR1Q03591 330 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 MAPK8IP2Q13387 824 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 FOXR2Q6PJQ5 311 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 FAM183BPQ6ZVS7 135 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 DCP2Q8IU60 420 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SLC25A45Q8N413 288 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 TMIEQ8NEW7 156 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 OR13H1Q8NG92 308 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 MAPK15Q8TD08 544 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 KCNE4Q8WWG9 221 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CPXM1Q96SM3 734 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SRRTQ9BXP5 876 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 WDCPQ9H6R7 721 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 THSD1Q9NS62 852 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 UCKL1Q9NWZ5 548 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 RRN3Q9NYV6 651 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 IL36AQ9UHA7 158 aa13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 IPO11Q9UI26 975 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PTPRQQ9UMZ3 2332 aa13.27□□□□□ -0.28
TNFRSF1A-207ENST00000535958 BIN1O00499 593 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 OPA1O60313 960 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CSO75390 466 aaKnown RBP13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 C1QL1O75973 258 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 GP1BAP07359 652 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 RRM1P23921 792 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SULT1E1P49888 294 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 IRAK1P51617 712 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 NEK3P51956 506 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 MARSP56192 900 aaKnown RBP13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TAS2R38P59533 333 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 RHDQ02161 417 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PTK2Q05397 1052 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 BRMS1LQ5PSV4 323 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 KIAA1161Q6NSJ0 714 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 C22orf39Q6P5X5 142 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 GBP6Q6ZN66 633 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ERN2Q76MJ5 926 aaKnown RBP13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SETD3Q86TU7 594 aaPredicted RBP13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 DCAF4L2Q8NA75 395 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 C1orf131Q8NDD1 294 aaKnown RBP13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ALG14Q96F25 216 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 IFT43Q96FT9 208 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 APOLD1Q96LR9 279 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TKTL2Q9H0I9 626 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ACP6Q9NPH0 428 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 NCKIPSDQ9NZQ3 722 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 APEX2Q9UBZ4 518 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 VPS51Q9UID3 782 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TBC1D30Q9Y2I9 924 aa13.27□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SNAP91O60641 907 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CTSLP07711 333 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PLA2G2AP14555 144 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 RBMS1P29558 406 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms