RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 DDIT4Q9NX09 232 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.25□□□□□ -1.09
CHFR-211ENST00000535897 IPO11Q9UI26 975 aaKnown RBP8.25□□□□□ -1.09
CHFR-211ENST00000535897 VANGL2Q9ULK5 521 aa8.25□□□□□ -1.09
CHFR-211ENST00000535897 PTPN13Q12923 2485 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 TRIM49BA6NDI0 452 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 H3BM21 787 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 K7ESM1 405 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 SCAMP1O15126 338 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 ARHGAP6O43182 974 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 MED7O43513 233 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 ATP9BO43861 1147 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 ZNF202O95125 648 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 LETM1O95202 739 aaPredicted RBP8.24□□□□□ -1.09
CHFR-211ENST00000535897 GIMD1P0DJR0 217 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 CCR1P32246 355 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 CHRNA3P32297 505 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 GGCXP38435 758 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 GPD2P43304 727 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 RECQLP46063 649 aaPredicted RBP8.24□□□□□ -1.09
CHFR-211ENST00000535897 PLK1P53350 603 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 PMS1P54277 932 aaKnown RBP8.24□□□□□ -1.09
CHFR-211ENST00000535897 PITX1P78337 314 aaPredicted RBP8.24□□□□□ -1.09
CHFR-211ENST00000535897 KRT83P78385 493 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 CDK17Q00537 523 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 LRRC63Q05C16 580 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 NME3Q13232 169 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 PNOCQ13519 176 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 TAF5Q15542 800 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 ISXQ2M1V0 245 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 ZNF284Q2VY69 593 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 ZSCAN23Q3MJ62 389 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 ZNF658Q5TYW1 1059 aaPredicted RBP8.24□□□□□ -1.09
CHFR-211ENST00000535897 SEL1L3Q68CR1 1132 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 ZCCHC8Q6NZY4 707 aaKnown RBP8.24□□□□□ -1.09
CHFR-211ENST00000535897 FBXL22Q6P050 247 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 NEK5Q6P3R8 708 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 DENND1BQ6P3S1 775 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 CRTC1Q6UUV9 634 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 GCNT7Q6ZNI0 430 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 Q6ZSR6 202 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 BEND5Q7L4P6 421 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 EFL1Q7Z2Z2 1120 aaKnown RBP8.24□□□□□ -1.09
CHFR-211ENST00000535897 SLC22A18ASQ8N1D0 253 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 ARL14Q8N4G2 192 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 SH2D3CQ8N5H7 860 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 ZNF548Q8NEK5 533 aaPredicted RBP8.24□□□□□ -1.09
CHFR-211ENST00000535897 ARRDC3Q96B67 414 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 PPP1R16AQ96I34 528 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 MED15Q96RN5 788 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 PRMT1Q99873 361 aaKnown RBP8.24□□□□□ -1.09
CHFR-211ENST00000535897 C2orf49Q9BVC5 232 aaPredicted RBP8.24□□□□□ -1.09
CHFR-211ENST00000535897 FAM117AQ9C073 453 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 GOLPH3LQ9H4A5 285 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 THAP9Q9H5L6 903 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 USP29Q9HBJ7 922 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 METTL14Q9HCE5 456 aaKnown RBP8.24□□□□□ -1.09
CHFR-211ENST00000535897 ASCL3Q9NQ33 180 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 NCKIPSDQ9NZQ3 722 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 HEMK1Q9Y5R4 338 aaPredicted RBP8.24□□□□□ -1.09
CHFR-211ENST00000535897 BOD1L1Q8NFC6 3051 aa8.24□□□□□ -1.09
CHFR-211ENST00000535897 UBR5O95071 2799 aaPredicted RBP8.24□□□□□ -1.09
CHFR-211ENST00000535897 FAM237AA0A1B0GTK4 181 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 CYSRT1A8MQ03 144 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 K7ERQ8 282 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 THAP12O43422 761 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 CLDN11O75508 207 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 GRAP2O75791 330 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 ENDOD1O94919 500 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 TNFSF15O95150 251 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 WISP1O95388 367 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 IGLV3-25P01717 112 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 PRNPP04156 253 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 CTSLP07711 333 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 RHOCP08134 193 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 SRCP12931 536 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 TGM2P21980 687 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 VASPP50552 380 aaPredicted RBP8.23□□□□□ -1.09
CHFR-211ENST00000535897 IRAK1P51617 712 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 GCNT1Q02742 428 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 STIM1Q13586 685 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 AUHQ13825 339 aaKnown RBP8.23□□□□□ -1.09
CHFR-211ENST00000535897 DEFB133Q30KQ1 61 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 ARSIQ5FYB1 569 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 GUSBP11Q6P575 273 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 RBM44Q6ZP01 1051 aaKnown RBP8.23□□□□□ -1.09
CHFR-211ENST00000535897 ERN2Q76MJ5 926 aaKnown RBP8.23□□□□□ -1.09
CHFR-211ENST00000535897 PARGQ86W56 976 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 DCP2Q8IU60 420 aaKnown RBP8.23□□□□□ -1.09
CHFR-211ENST00000535897 ARHGEF19Q8IW93 802 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 DEFB106AQ8N104 65 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 OR52K2Q8NGK3 314 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 LMX1AQ8TE12 382 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 STK32AQ8WU08 396 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 TTC9Q92623 222 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 SNX21Q969T3 373 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 ALG14Q96F25 216 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 IL12RB2Q99665 862 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 SLC4A5Q9BY07 1137 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 GTPBP4Q9BZE4 634 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms