RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 SMARCAD1Q9H4L7 1026 aa8.14□□□□□ -1.11
LMO3-212ENST00000535535 AGO3Q9H9G7 860 aaKnown RBP8.14□□□□□ -1.11
LMO3-212ENST00000535535 VPS37BQ9H9H4 285 aa8.14□□□□□ -1.11
LMO3-212ENST00000535535 Q9UFV3 132 aa8.14□□□□□ -1.11
LMO3-212ENST00000535535 CIDEBQ9UHD4 219 aa8.14□□□□□ -1.11
LMO3-212ENST00000535535 ZNF215Q9UL58 517 aaPredicted RBP8.14□□□□□ -1.11
LMO3-212ENST00000535535 PCDHB2Q9Y5E7 798 aa8.14□□□□□ -1.11
LMO3-212ENST00000535535 HS3ST3A1Q9Y663 406 aa8.14□□□□□ -1.11
LMO3-212ENST00000535535 ZFHX4Q86UP3 3567 aa8.14□□□□□ -1.11
LMO3-212ENST00000535535 WDR81Q562E7 1941 aa8.14□□□□□ -1.11
LMO3-212ENST00000535535 FRMPD4Q14CM0 1322 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 SALL3Q9BXA9 1300 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 SPTBN2O15020 2390 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 A0A0D9SFI3 127 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 LRRC72A6NJI9 287 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 PARP1P09874 1014 aaKnown RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 PRLRP16471 622 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 MX1P20591 662 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 S100A1P23297 94 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 CLNS1AP54105 237 aaKnown RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 MRPS9P82933 396 aaKnown RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 UBE3AQ05086 875 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 PLCB4Q15147 1175 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 SAFBQ15424 915 aaKnown RBP eCLIP8.13□□□□□ -1.11
LMO3-212ENST00000535535 OASLQ15646 514 aaKnown RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 NRN1LQ496H8 165 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 USP39Q53GS9 565 aaKnown RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 KDELC1Q6UW63 502 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 RSRC2Q7L4I2 434 aaKnown RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 RTN4RL1Q86UN2 441 aaPredicted RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 ZNF589Q86UQ0 364 aaPredicted RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 UBALD2Q8IYN6 164 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 ADSSL1Q8N142 457 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 MGARPQ8TDB4 240 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 ESR2Q92731 530 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 MTMR8Q96EF0 704 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 INPP4AQ96PE3 977 aaPredicted RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 CDCA3Q99618 268 aaPredicted RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 STMN4Q9H169 189 aaPredicted RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 OR10A2Q9H208 303 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 VAT1LQ9HCJ6 419 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 SPTLC3Q9NUV7 552 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 LCMT1Q9UIC8 334 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 RIMKLBQ9ULI2 386 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 SORCS3Q9UPU3 1222 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 B3GALT1Q9Y5Z6 326 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 CHD6Q8TD26 2715 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 MAP1BP46821 2468 aaKnown RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 CHD8Q9HCK8 2581 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 MBLAC1A4D2B0 266 aaPredicted RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 LIN7AO14910 233 aaPredicted RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 TMCC1O94876 653 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 AGR2O95994 175 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 SLC4A1P02730 911 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 SP100P23497 879 aaPredicted RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 SDHAP31040 664 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 CD52P31358 61 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 ACTN2P35609 894 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 RPS19P39019 145 aaKnown RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 GATMP50440 423 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 DSTNP60981 165 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 UBXN1Q04323 297 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 HGFACQ04756 655 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 GRSF1Q12849 480 aaKnown RBP eCLIP8.13□□□□□ -1.11
LMO3-212ENST00000535535 CFAP157Q5JU67 520 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 NDUFAF5Q5TEU4 345 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 TWF2Q6IBS0 349 aaKnown RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 ANKRD54Q6NXT1 300 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 SYCE2Q6PIF2 218 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 LRRTM3Q86VH5 581 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 DNAJB3Q8WWF6 145 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 JPH3Q8WXH2 748 aaPredicted RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 FAM227BQ96M60 508 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 FTHL17Q9BXU8 183 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 PARD6BQ9BYG5 372 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 AGXT2Q9BYV1 514 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 C12orf65Q9H3J6 166 aaKnown RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 CLSTN2Q9H4D0 955 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 RNF41Q9H4P4 317 aaPredicted RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 C8orf33Q9H7E9 229 aaPredicted RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 KAT14Q9H8E8 782 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 WDR35Q9P2L0 1181 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 TUBE1Q9UJT0 475 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 ING1Q9UK53 422 aaPredicted RBP8.13□□□□□ -1.11
LMO3-212ENST00000535535 ASB1Q9Y576 335 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 PCDHA1Q9Y5I3 950 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 CDY2AQ9Y6F7 541 aa8.13□□□□□ -1.11
LMO3-212ENST00000535535 MYH9P35579 1960 aaKnown RBP8.12□□□□□ -1.11
LMO3-212ENST00000535535 GOLGA6L7A0A1B0GV03 622 aa8.12□□□□□ -1.11
LMO3-212ENST00000535535 MED19A0JLT2 244 aaPredicted RBP8.12□□□□□ -1.11
LMO3-212ENST00000535535 NPIPB8E9PQR5 432 aa8.12□□□□□ -1.11
LMO3-212ENST00000535535 ZBTB5O15062 677 aa8.12□□□□□ -1.11
LMO3-212ENST00000535535 NVLO15381 856 aaKnown RBP8.12□□□□□ -1.11
LMO3-212ENST00000535535 MAFO75444 373 aaPredicted RBP8.12□□□□□ -1.11
LMO3-212ENST00000535535 SNX4O95219 450 aa8.12□□□□□ -1.11
LMO3-212ENST00000535535 SERPINC1P01008 464 aa8.12□□□□□ -1.11
LMO3-212ENST00000535535 STAG3L1P0CL83 205 aa8.12□□□□□ -1.11
LMO3-212ENST00000535535 CCDC166P0CW27 439 aa8.12□□□□□ -1.11
LMO3-212ENST00000535535 SRGAP2BP0DMP2 458 aa8.12□□□□□ -1.11
LMO3-212ENST00000535535 EPB41P11171 864 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms