RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 CSADQ9Y600 493 aa5.3□□□□□ -1.56
SNHG1-201ENST00000535076 RPRD2Q5VT52 1461 aaKnown RBP5.3□□□□□ -1.56
SNHG1-201ENST00000535076 ARAP1Q96P48 1450 aa5.3□□□□□ -1.56
SNHG1-201ENST00000535076 PIK3C2GO75747 1445 aa5.3□□□□□ -1.56
SNHG1-201ENST00000535076 TMEM131LA2VDJ0 1609 aa5.3□□□□□ -1.56
SNHG1-201ENST00000535076 PTPN23Q9H3S7 1636 aa5.3□□□□□ -1.56
SNHG1-201ENST00000535076 LAMC3Q9Y6N6 1575 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 CUX1P39880 1505 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ARHGEF12Q9NZN5 1544 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 CROCC2H7BZ55 1655 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ADGRL2O95490 1459 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 A0A1B0GVC2 190 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 PQLC2LA1A4F0 135 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 HMX3A6NHT5 357 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ZNF839A8K0R7 811 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 A8MXQ7 604 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 F8W8V4 182 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 K7EPI3 171 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 KCNQ3O43525 872 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 EXOC3O60645 756 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 NBNO60934 754 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 TIPRLO75663 272 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 CBR3O75828 277 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 DEXIO95424 95 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 VNN1O95497 513 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 WNT11O96014 354 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 DHFRP00374 187 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 CRYABP02511 175 aaKnown RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 NTRK1P04629 796 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 C8BP07358 591 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 QDPRP09417 244 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 FAM87AP0C7U9 286 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 CLUP10909 449 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 SLC9A1P19634 815 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 PDCP20941 246 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ALDH1A3P47895 512 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 CDK8P49336 464 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ARHGDIAP52565 204 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 NR1H2P55055 460 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 C21orf59P57076 290 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 CARD18P57730 90 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 SPCS3P61009 180 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ABATP80404 500 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 DSG1Q02413 1049 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 CALCOCO2Q13137 446 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 SNTA1Q13424 505 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 MTMR1Q13613 665 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ARHGAP19Q14CB8 494 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 CLCA4Q14CN2 919 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 MORF4L2Q15014 288 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 LTB4RQ15722 352 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 CPSF6Q16630 551 aaKnown RBP eCLIP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ABCB5Q2M3G0 1257 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 WDR72Q3MJ13 1102 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 SPATS1Q496A3 300 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ESCO2Q56NI9 601 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 MDH1BQ5I0G3 518 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 PPM1JQ5JR12 505 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 PTRHD1Q6GMV3 140 aaKnown RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ELP2Q6IA86 826 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 CENPPQ6IPU0 288 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 FUT10Q6P4F1 479 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ALKBH5Q6P6C2 394 aaKnown RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 OGFOD3Q6PK18 319 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 TRIM72Q6ZMU5 477 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ZNF574Q6ZN55 896 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 LRRC74BQ6ZQY2 392 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 RGS9BPQ6ZS82 235 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 NUP54Q7Z3B4 507 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 TMPRSS9Q7Z410 1059 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 SETD3Q86TU7 594 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 FJX1Q86VR8 437 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 TDRPQ86YL5 185 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 RIOX2Q8IUF8 465 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 RASGRP3Q8IV61 690 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 GSPT2Q8IYD1 628 aaKnown RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 FAM26EQ8N5C1 309 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 METTL25Q8N6Q8 603 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ANKRD13CQ8N6S4 541 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 C12orf29Q8N999 325 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 VANGL1Q8TAA9 524 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 RIN3Q8TB24 985 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ZNF507Q8TCN5 953 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 TCP10LQ8TDR4 215 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ACTRT2Q8TDY3 377 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 SH3RF3Q8TEJ3 882 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 TSPEARQ8WU66 669 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 PRPF31Q8WWY3 499 aaKnown RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 TRIB2Q92519 343 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 PRCCQ92733 491 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 YIPF5Q969M3 257 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 GAL3ST3Q96A11 431 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 GRAMD1AQ96CP6 724 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 OMA1Q96E52 524 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 SUCLG2Q96I99 432 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 TXNDC15Q96J42 360 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ZIM3Q96PE6 472 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 BTBD9Q96Q07 612 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 LMF1Q96S06 567 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms