RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 MFHAS1Q9Y4C4 1052 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 A0A1W2PQJ5 194 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 CFAP69A5D8W1 941 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 RNASEH2AO75792 299 aaKnown RBP10.63□□□□□ -0.71
CSDE1-217ENST00000534699 ZMPSTE24O75844 475 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 ITGB7P26010 798 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 DRD3P35462 400 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 HCAR3P49019 387 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 ARRB1P49407 418 aaPredicted RBP10.63□□□□□ -0.71
CSDE1-217ENST00000534699 BNC1Q01954 994 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 APBA1Q02410 837 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 RAD51Q06609 339 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 PARP15Q460N3 678 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 CCDC14Q49A88 953 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 C22orf39Q6P5X5 142 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 ADAT2Q7Z6V5 191 aaKnown RBP10.63□□□□□ -0.71
CSDE1-217ENST00000534699 C14orf80Q86SX3 495 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 NLRP14Q86W24 1093 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 AADATQ8N5Z0 425 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 HEPHQ9BQS7 1158 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 MIR1-1HGQ9H1L0 117 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 IL36AQ9UHA7 158 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 A0A1W2PP55 124 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 KDELR3O43731 214 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 GRAP2O75791 330 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 CTSOP43234 321 aaPredicted RBP10.62□□□□□ -0.71
CSDE1-217ENST00000534699 CSNK1DP48730 415 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 NXPH1P58417 271 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 SNRPD1P62314 119 aaKnown RBP10.62□□□□□ -0.71
CSDE1-217ENST00000534699 CARD16Q5EG05 197 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 EFHC2Q5JST6 749 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 PPP1R15BQ5SWA1 713 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 ARTNQ5T4W7 220 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 NCEH1Q6PIU2 408 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 CPA5Q8WXQ8 436 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 CNTNAP3BQ96NU0 1288 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 ELF4Q99607 663 aaPredicted RBP10.62□□□□□ -0.71
CSDE1-217ENST00000534699 EPAS1Q99814 870 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 SYT11Q9BT88 431 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 CNTNAP3Q9BZ76 1288 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 SIK2Q9H0K1 926 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 FAM207AQ9NSI2 230 aaPredicted RBP10.62□□□□□ -0.71
CSDE1-217ENST00000534699 PARVAQ9NVD7 372 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 NCKIPSDQ9NZQ3 722 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 DKK3Q9UBP4 350 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 SCINQ9Y6U3 715 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 A0A1B0GVT2 93 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 A0A1W2PQ67 120 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 TSPAN6O43657 245 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 IL1BP01584 269 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 TNFAIP3P21580 790 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 AKT2P31751 481 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 NEK3P51956 506 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 NDST2P52849 883 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 TAF3Q5VWG9 929 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 DNAJC24Q6P3W2 148 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 MMS22LQ6ZRQ5 1243 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 ERN2Q76MJ5 926 aaKnown RBP10.62□□□□□ -0.71
CSDE1-217ENST00000534699 SLFN11Q7Z7L1 901 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 ATP11CQ8NB49 1132 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 GATA6Q92908 595 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 KCTD5Q9NXV2 234 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 OR12D3Q9UGF7 316 aa10.62□□□□□ -0.71
CSDE1-217ENST00000534699 TLR4O00206 839 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 POP4O95707 220 aaKnown RBP10.61□□□□□ -0.71
CSDE1-217ENST00000534699 PLEKP08567 350 aaPredicted RBP10.61□□□□□ -0.71
CSDE1-217ENST00000534699 SIM1P81133 766 aaPredicted RBP10.61□□□□□ -0.71
CSDE1-217ENST00000534699 RFTN1Q14699 578 aaPredicted RBP10.61□□□□□ -0.71
CSDE1-217ENST00000534699 POLD3Q15054 466 aaPredicted RBP10.61□□□□□ -0.71
CSDE1-217ENST00000534699 KIF19Q2TAC6 998 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 AGBL4Q5VU57 503 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 UNQ6494/PRO21346Q6UXR6 183 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 TMPRSS7Q7RTY8 843 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 HORMAD1Q86X24 394 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 DRC7Q8IY82 874 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 MCOLN2Q8IZK6 566 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 UMODL1-AS1Q8N2C9 162 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 SDR16C5Q8N3Y7 309 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 LZTR1Q8N653 840 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 DEFB119Q8N690 84 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 RTL3Q8N8U3 475 aaKnown RBP10.61□□□□□ -0.71
CSDE1-217ENST00000534699 OR2A12Q8NGT7 310 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 OR14C36Q8NHC7 312 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 ARHGEF2Q92974 986 aaKnown RBP10.61□□□□□ -0.71
CSDE1-217ENST00000534699 TMEM121BQ9BXQ6 578 aaPredicted RBP10.61□□□□□ -0.71
CSDE1-217ENST00000534699 CPEB1Q9BZB8 566 aaKnown RBP10.61□□□□□ -0.71
CSDE1-217ENST00000534699 ATP13A1Q9HD20 1204 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 MRPL47Q9HD33 250 aaKnown RBP10.61□□□□□ -0.71
CSDE1-217ENST00000534699 CD93Q9NPY3 652 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 TMEM131Q92545 1883 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 A0A1B0GTH6 734 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 GOLGA8SH3BPF8 625 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 RNASE9P60153 205 aaKnown RBP10.61□□□□□ -0.71
CSDE1-217ENST00000534699 STAT4Q14765 748 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 ACCSLQ4AC99 568 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 ALFQ53S48 1182 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 PLEKHA7Q6IQ23 1121 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 IRF2BP2Q7Z5L9 587 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 FAM124AQ86V42 546 aa10.61□□□□□ -0.71
CSDE1-217ENST00000534699 SNX19Q92543 992 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms