RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	BECN2	A8MW95	431 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	CBX4	O00257	560 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	MCF2L	O15068	1137 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	GNA14	O95837	355 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	CALCA	P01258	141 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	STK19	P49842	368 aa	Predicted RBP	11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	PPP2CB	P62714	309 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	PPP2CA	P67775	309 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	TPM4	P67936	248 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	PROX2	Q3B8N5	592 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	C5orf22	Q49AR2	442 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	CCDC40	Q4G0X9	1142 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	RABGAP1L	Q5R372	815 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	SWT1	Q5T5J6	900 aa	Known RBP	11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	HES3	Q5TGS1	186 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	CXorf57	Q6NSI4	855 aa	Known RBP	11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	NEK5	Q6P3R8	708 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	DENND1B	Q6P3S1	775 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	CHSY1	Q86X52	802 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	OR8D1	Q8WZ84	308 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	ERCC4	Q92889	916 aa	Predicted RBP	11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	FEM1A	Q9BSK4	669 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	TGIF2	Q9GZN2	237 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	ASNSD1	Q9NWL6	643 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	OR51B4	Q9Y5P0	310 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	PLXNA2	O75051	1894 aa		11.87	□□□□□ -0.51
CTNND1-238	ENST00000534647	HELZ2	Q9BYK8	2649 aa	Known RBP	11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	BICDL2	A1A5D9	508 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647		E5RJQ4	531 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	PRAMEF26	H0Y7S4	382 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	BIN1	O00499	593 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	ATXN7	O15265	892 aa	Predicted RBP	11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	RRP8	O43159	456 aa	Known RBP	11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	TLX3	O43711	291 aa	Predicted RBP	11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	RTN2	O75298	545 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	VAV1	P15498	845 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	PDGFRA	P16234	1089 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	CCR1	P32246	355 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	CDK17	Q00537	523 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	E2F1	Q01094	437 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	STAT4	Q14765	748 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	AGBL4	Q5VU57	503 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	FBXL22	Q6P050	247 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	LRRC69	Q6ZNQ3	347 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	ENOSF1	Q7L5Y1	443 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	DCBLD1	Q8N8Z6	715 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	CRELD1	Q96HD1	420 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	FAM81B	Q96LP2	452 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	SLC2A13	Q96QE2	648 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	CBX8	Q9HC52	389 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	PREB	Q9HCU5	417 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	SEPT3	Q9UH03	358 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	DACH1	Q9UI36	760 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	SARDH	Q9UL12	918 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	TBC1D30	Q9Y2I9	924 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	AK5	Q9Y6K8	562 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	CELSR3	Q9NYQ7	3312 aa		11.86	□□□□□ -0.51
CTNND1-238	ENST00000534647	BMP6	P22004	513 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	ITPKB	P27987	946 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	METAP1	P53582	386 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	PITX1	P78337	314 aa	Predicted RBP	11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	CCDC15	Q0P6D6	951 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	C19orf57	Q0VDD7	668 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	CNTN1	Q12860	1018 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	AUH	Q13825	339 aa	Known RBP	11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	DLG2	Q15700	870 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	SETMAR	Q53H47	684 aa	Predicted RBP	11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	EFHC1	Q5JVL4	640 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	SLC25A45	Q8N413	288 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	TMEM145	Q8NBT3	493 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	BAP1	Q92560	729 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	FGF11	Q92914	225 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	TRIM44	Q96DX7	344 aa	Predicted RBP	11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	DCBLD2	Q96PD2	775 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	INTS2	Q9H0H0	1204 aa	Known RBP	11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	TMEM51	Q9NW97	253 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	HS3ST2	Q9Y278	367 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	LOC400499	M0QZD8	3231 aa		11.85	□□□□□ -0.51
CTNND1-238	ENST00000534647	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	SMTNL1	A8MU46	457 aa		11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	C1QTNF3-AMACR	E9PGA6	284 aa		11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	HSF2BP	O75031	334 aa		11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	CLDN11	O75508	207 aa		11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	AFP	P02771	609 aa	Known RBP	11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	KRT5	P13647	590 aa		11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	GLDC	P23378	1020 aa		11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	ACTN2	P35609	894 aa		11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	CLDN6	P56747	220 aa		11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	TAS2R38	P59533	333 aa		11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	INSM1	Q01101	510 aa	Predicted RBP	11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	SEMG2	Q02383	582 aa		11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	ZNF177	Q13360	481 aa	Predicted RBP	11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	PDCL	Q13371	301 aa		11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	TAF5	Q15542	800 aa		11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	DEFB106A	Q8N104	65 aa		11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	WDTC1	Q8N5D0	677 aa		11.84	□□□□□ -0.51
CTNND1-238	ENST00000534647	SH2D3C	Q8N5H7	860 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 269.6 ms