RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 GGT7Q9UJ14 662 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 KLK13Q9UKR3 277 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 PPM1HQ9ULR3 514 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 ANKRD6Q9Y2G4 727 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 PTPRBP23467 1997 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 A0A1W2PR77 199 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 TARSL2A2RTX5 802 aaKnown RBP9.86□□□□□ -0.83
SSBP3-215ENST00000533946 TYW5A2RUC4 315 aaKnown RBP9.86□□□□□ -0.83
SSBP3-215ENST00000533946 SIGLEC16A6NMB1 481 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 INSIG1O15503 277 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 SPINT1O43278 529 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 CBFA2T3O75081 653 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 KRT3P12035 628 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 PRLRP16471 622 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 GPD1P21695 349 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 OR1E1P30953 314 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 PBX1P40424 430 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 SEMG2Q02383 582 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 FGL2Q14314 439 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 ARSIQ5FYB1 569 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 WDR45BQ5MNZ6 344 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 SYCP2LQ5T4T6 812 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 ATXN7L2Q5T6C5 722 aaPredicted RBP9.86□□□□□ -0.83
SSBP3-215ENST00000533946 PIP5KL1Q5T9C9 394 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 HGSNATQ68CP4 663 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 TXNRD3NBQ6F5E7 133 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 ACAD10Q6JQN1 1059 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 RWDD4Q6NW29 188 aaKnown RBP9.86□□□□□ -0.83
SSBP3-215ENST00000533946 DPY19L3Q6ZPD9 716 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 ZNF677Q86XU0 584 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 SPATS2Q86XZ4 545 aaKnown RBP9.86□□□□□ -0.83
SSBP3-215ENST00000533946 CHCHD4Q8N4Q1 142 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 ATP11CQ8NB49 1132 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 CEP76Q8TAP6 659 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 PIP4K2CQ8TBX8 421 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 GRIN3AQ8TCU5 1115 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 FOXJ1Q92949 421 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 FAM131CQ96AQ9 280 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 BTBD6Q96KE9 485 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 HAPLN3Q96S86 360 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 OMDQ99983 421 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 BPIFA3Q9BQP9 254 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 TMEM121BQ9BXQ6 578 aaPredicted RBP9.86□□□□□ -0.83
SSBP3-215ENST00000533946 DNAAF2Q9NVR5 837 aaKnown RBP9.86□□□□□ -0.83
SSBP3-215ENST00000533946 TOR4AQ9NXH8 423 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 ADAMTS1Q9UHI8 967 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 STAP1Q9ULZ2 295 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 ZFR2Q9UPR6 939 aaKnown RBP9.86□□□□□ -0.83
SSBP3-215ENST00000533946 WASF2Q9Y6W5 498 aa9.86□□□□□ -0.83
SSBP3-215ENST00000533946 GOLGA6L22H0YM25 854 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 MCF2LO15068 1137 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 CASC3O15234 703 aaKnown RBP9.85□□□□□ -0.83
SSBP3-215ENST00000533946 OPHN1O60890 802 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 MOCS3O95396 460 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 ATXN1LP0C7T5 689 aaKnown RBP9.85□□□□□ -0.83
SSBP3-215ENST00000533946 GOT1P17174 413 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 CSRP1P21291 193 aaKnown RBP9.85□□□□□ -0.83
SSBP3-215ENST00000533946 CD27P26842 260 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 SDC4P31431 198 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 CTSKP43235 329 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 PTPN9P43378 593 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 NSFP46459 744 aaKnown RBP9.85□□□□□ -0.83
SSBP3-215ENST00000533946 SIM1P81133 766 aaPredicted RBP9.85□□□□□ -0.83
SSBP3-215ENST00000533946 FANCCQ00597 558 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 GNA12Q03113 381 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 BNIP3Q12983 259 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 MAMLD1Q13495 774 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 TPRG1LQ5T0D9 272 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 SEL1L3Q68CR1 1132 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 SCYL2Q6P3W7 929 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 ARHGAP36Q6ZRI8 547 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 KDM1BQ8NB78 822 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 C3orf20Q8ND61 904 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 CPLX3Q8WVH0 158 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 ARHGEF2Q92974 986 aaKnown RBP9.85□□□□□ -0.83
SSBP3-215ENST00000533946 SCNM1Q9BWG6 230 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 ACE2Q9BYF1 805 aaPredicted RBP9.85□□□□□ -0.83
SSBP3-215ENST00000533946 TM6SF2Q9BZW4 377 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 ZYG11BQ9C0D3 744 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 FZD10Q9ULW2 581 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 HS3ST2Q9Y278 367 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 ITM2BQ9Y287 266 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 LRRK1Q38SD2 2015 aa9.85□□□□□ -0.83
SSBP3-215ENST00000533946 ZFYVE26Q68DK2 2539 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TBC1D3DA0A087WVF3 549 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TBC1D3IA0A087WXS9 549 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TBC1D3EA0A087X179 549 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TBC1D3KA0A087X1G2 549 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 A0A1W2PPC4 97 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TTC24A2A3L6 582 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TBC1D3FA6NER0 549 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 GOLGA8CPA6NN73 597 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TBC1D3LB9A6J9 549 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 RAD51BO15315 384 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 FOXD2O60548 495 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 LEFTY1O75610 366 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 F9P00740 461 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 FTLP02792 175 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TBC1D3HP0C7X1 549 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 MYF5P13349 255 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms