RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 ZCCHC8Q6NZY4 707 aaKnown RBP9.49□□□□□ -0.89
PACS1-214ENST00000533811 USP53Q70EK8 1073 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 SMYD4Q8IYR2 804 aaPredicted RBP9.49□□□□□ -0.89
PACS1-214ENST00000533811 GUF1Q8N442 669 aaKnown RBP9.49□□□□□ -0.89
PACS1-214ENST00000533811 WDR36Q8NI36 951 aaKnown RBP9.49□□□□□ -0.89
PACS1-214ENST00000533811 GRIN3AQ8TCU5 1115 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 LMX1AQ8TE12 382 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 EXTL1Q92935 676 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 PRR11Q96HE9 360 aaPredicted RBP9.49□□□□□ -0.89
PACS1-214ENST00000533811 HSFY1Q96LI6 401 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 CCDC114Q96M63 670 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 RPRD1AQ96P16 312 aaPredicted RBP9.49□□□□□ -0.89
PACS1-214ENST00000533811 CCNL2Q96S94 520 aaPredicted RBP9.49□□□□□ -0.89
PACS1-214ENST00000533811 IL12RB2Q99665 862 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 FAM204AQ9H8W3 233 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 SLC12A6Q9UHW9 1150 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 CCDC187A0A096LP49 1063 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 CDRT15L2A8MXV6 281 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 K7ELQ4 463 aaPredicted RBP9.48□□□□□ -0.89
PACS1-214ENST00000533811 AGRPO00253 132 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 CASC3O15234 703 aaKnown RBP9.48□□□□□ -0.89
PACS1-214ENST00000533811 SART1O43290 800 aaKnown RBP9.48□□□□□ -0.89
PACS1-214ENST00000533811 AQP9O43315 295 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 GJB6O95452 261 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 TRUB2O95900 331 aaKnown RBP9.48□□□□□ -0.89
PACS1-214ENST00000533811 F13A1P00488 732 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 MYL1P05976 194 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 CTSLP07711 333 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 PAEPP09466 180 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 JUNDP17535 347 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 CHRNA3P32297 505 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 GGCXP38435 758 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 OXCT1P55809 520 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 PITX1P78337 314 aaPredicted RBP9.48□□□□□ -0.89
PACS1-214ENST00000533811 SKOR1P84550 965 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 DNM1Q05193 864 aaKnown RBP9.48□□□□□ -0.89
PACS1-214ENST00000533811 CCDC15Q0P6D6 951 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 SPIDRQ14159 915 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 STILQ15468 1287 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 CNGA2Q16280 664 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 ARL13BQ3SXY8 428 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 ZCWPW2Q504Y3 356 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 TTC39BQ5VTQ0 682 aaPredicted RBP9.48□□□□□ -0.89
PACS1-214ENST00000533811 NEK5Q6P3R8 708 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 IGF2-ASQ6U949 168 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 ATG14Q6ZNE5 492 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 ABI3BPQ7Z7G0 1075 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 PPM1KQ8N3J5 372 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 SH2D3CQ8N5H7 860 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 UBR7Q8N806 425 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 ATP11CQ8NB49 1132 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 TPCN2Q8NHX9 752 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 IFT43Q96FT9 208 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 NT5C1BQ96P26 610 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 PPP1R9BQ96SB3 815 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 ZSWIM1Q9BR11 485 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 MUC3BQ9H195 1237 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 EPB41L5Q9HCM4 733 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 USP25Q9UHP3 1055 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 ATXN7L1Q9ULK2 861 aaPredicted RBP9.48□□□□□ -0.89
PACS1-214ENST00000533811 VANGL2Q9ULK5 521 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 ZFR2Q9UPR6 939 aaKnown RBP9.48□□□□□ -0.89
PACS1-214ENST00000533811 PCDHGA8Q9Y5G5 932 aa9.48□□□□□ -0.89
PACS1-214ENST00000533811 POM121BA6NF01 834 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 KCNU1A8MYU2 1149 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 RNF225M0QZC1 329 aaPredicted RBP9.47□□□□□ -0.89
PACS1-214ENST00000533811 TERTO14746 1132 aaKnown RBP9.47□□□□□ -0.89
PACS1-214ENST00000533811 SNAP91O60641 907 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 ENDOD1O94919 500 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 MT-CO1P00395 513 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 FAM87AP0C7U9 286 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 ZSCAN22P10073 491 aaPredicted RBP9.47□□□□□ -0.89
PACS1-214ENST00000533811 SRCP12931 536 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 RRM1P23921 792 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 SYKP43405 635 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 IRAK1P51617 712 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 PLK1P53350 603 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 DPYDQ12882 1025 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 SRSF6Q13247 344 aaKnown RBP9.47□□□□□ -0.89
PACS1-214ENST00000533811 C1orf61Q13536 156 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 FZD2Q14332 565 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 EDRF1Q3B7T1 1238 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 LINC00303Q3SY05 128 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 ARSIQ5FYB1 569 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 FBXL22Q6P050 247 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 KYAT3Q6YP21 454 aaKnown RBP9.47□□□□□ -0.89
PACS1-214ENST00000533811 ERN2Q76MJ5 926 aaKnown RBP9.47□□□□□ -0.89
PACS1-214ENST00000533811 CLEC14AQ86T13 490 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 PARGQ86W56 976 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 DCP2Q8IU60 420 aaKnown RBP9.47□□□□□ -0.89
PACS1-214ENST00000533811 CHST14Q8NCH0 376 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 OR52K2Q8NGK3 314 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 KAT5Q92993 513 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 GRAMD1AQ96CP6 724 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 ALG14Q96F25 216 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 BMFQ96LC9 184 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 TSG101Q99816 390 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 PRMT1Q99873 361 aaKnown RBP9.47□□□□□ -0.89
PACS1-214ENST00000533811 FEM1AQ9BSK4 669 aa9.47□□□□□ -0.89
PACS1-214ENST00000533811 TRIM62Q9BVG3 475 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms