RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 OXNAD1Q96HP4 312 aaPredicted RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 SERAC1Q96JX3 654 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 KCNK16Q96T55 309 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 LGMNQ99538 433 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 PAIP2Q9BPZ3 127 aaKnown RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 SIKE1Q9BRV8 207 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 FTHL17Q9BXU8 183 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 TRIM55Q9BYV6 548 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 IQCGQ9H095 443 aaKnown RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 TRPV6Q9H1D0 765 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 GBA3Q9H227 469 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 SMOC2Q9H3U7 446 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 ELAC1Q9H777 363 aaKnown RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 LRRC40Q9H9A6 602 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 CASS4Q9NQ75 786 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 KLC4Q9NSK0 619 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 TRMT13Q9NUP7 481 aaKnown RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 COMMD8Q9NX08 183 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 RPL26L1Q9UNX3 145 aaKnown RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 FAM237BA0A1B0GVD1 139 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 WASH4PA8MWX3 477 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 LOC730098B7Z3J9 87 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 IRAK2O43187 625 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 CREB3O43889 395 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 DNAJC6O75061 913 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 GLRA3O75311 464 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 USP1O94782 785 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 UNC5CO95185 931 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 POLBP06746 335 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 PYGBP11216 843 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 CCNCP24863 283 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 DNAJB1P25685 340 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 PSMB4P28070 264 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 RFC2P35250 354 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 HADHAP40939 763 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 MAGEA11P43364 429 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 SERPINB4P48594 390 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 PPARDQ03181 441 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 BFSP2Q13515 415 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 PRPSAP1Q14558 356 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 TEX44Q53QW1 395 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 GRTP1Q5TC63 336 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 MANEALQ5VSG8 457 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 GLB1LQ6UWU2 654 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 SLC24A5Q71RS6 500 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 ASRGL1Q7L266 308 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 OTOAQ7RTW8 1153 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 GPRIN1Q7Z2K8 1008 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 PID1Q7Z2X4 250 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 LINC00523Q86TU6 105 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 FITM2Q8N6M3 262 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 PDCD7Q8N8D1 485 aaKnown RBP9.87□□□□□ -0.83
CHKA-207ENST00000533728 RNF169Q8NCN4 708 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 DQX1Q8TE96 717 aaKnown RBP9.87□□□□□ -0.83
CHKA-207ENST00000533728 DEPDC1BQ8WUY9 529 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 NDRG1Q92597 394 aaKnown RBP9.87□□□□□ -0.83
CHKA-207ENST00000533728 MRPL38Q96DV4 380 aaKnown RBP9.87□□□□□ -0.83
CHKA-207ENST00000533728 C8orf48Q96LL4 319 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 C7orf26Q96N11 449 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 TMEM237Q96Q45 408 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 LRRC37BQ96QE4 947 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 SRPK1Q96SB4 655 aaKnown RBP9.87□□□□□ -0.83
CHKA-207ENST00000533728 CPNE1Q99829 537 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 TSSK1BQ9BXA7 367 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 OXCT2Q9BYC2 517 aaPredicted RBP9.87□□□□□ -0.83
CHKA-207ENST00000533728 MAGEB5Q9BZ81 275 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 ZCWPW1Q9H0M4 648 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 CATSPERBQ9H7T0 1116 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 ARHGEF3Q9NR81 526 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 SMYD2Q9NRG4 433 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 TMEM30AQ9NV96 361 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 NSMCE4AQ9NXX6 385 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 IL37Q9NZH6 218 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 BFARQ9NZS9 450 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 SIRPGQ9P1W8 387 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 KLHL8Q9P2G9 620 aaPredicted RBP9.87□□□□□ -0.83
CHKA-207ENST00000533728 OR12D3Q9UGF7 316 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 DCDC2Q9UHG0 476 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 MTO1Q9Y2Z2 717 aaKnown RBP9.87□□□□□ -0.83
CHKA-207ENST00000533728 MFHAS1Q9Y4C4 1052 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 MAD1L1Q9Y6D9 718 aa9.87□□□□□ -0.83
CHKA-207ENST00000533728 CFAP46Q8IYW2 2715 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 CXorf49A8MYA2 514 aaPredicted RBP9.86□□□□□ -0.83
CHKA-207ENST00000533728 I3L4J1 428 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 TRAFD1O14545 582 aaPredicted RBP9.86□□□□□ -0.83
CHKA-207ENST00000533728 TNFRSF10BO14763 440 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 LRIG2O94898 1065 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 MAP3K6O95382 1288 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 CXCL10P02778 98 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 CSH1P0DML2 217 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 CSH2P0DML3 217 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 SRGAP2BP0DMP2 458 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 SLC2A3P11169 496 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 NQO1P15559 274 aaKnown RBP9.86□□□□□ -0.83
CHKA-207ENST00000533728 BDNFP23560 247 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 CCR1P32246 355 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 LTBRP36941 435 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 GP5P40197 560 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 MAGEA12P43365 314 aa9.86□□□□□ -0.83
CHKA-207ENST00000533728 POLD2P49005 469 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms