RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 MFSD7Q6UXD7 560 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 FAM228AQ86W67 206 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 TAGAPQ8N103 731 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 CXorf40BQ96DE9 158 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 SERAC1Q96JX3 654 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 MAGEB10Q96LZ2 347 aaPredicted RBP11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 SNRNP25Q9BV90 132 aaKnown RBP11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 CLDND1Q9NY35 253 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 GABRQQ9UN88 632 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 STXBP5LQ9Y2K9 1186 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 NEDD8-MDP1E9PL57 170 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 ATG13O75143 517 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 RARAP10276 462 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 EPB42P16452 691 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 SLC5A3P53794 718 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 CCDC85BQ15834 202 aaPredicted RBP11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 MROH9Q5TGP6 573 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 LRRC34Q8IZ02 419 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 ATG4AQ8WYN0 398 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 QRFPRQ96P65 431 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 APOL2Q9BQE5 337 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 MIR1-1HGQ9H1L0 117 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 DCLRE1BQ9H816 532 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 XPNPEP1Q9NQW7 623 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 TLR9Q9NR96 1032 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 RNF19AQ9NV58 838 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 ANKRD6Q9Y2G4 727 aa11.44□□□□□ -0.58
AMBRA1-211ENST00000533727 DLG5Q8TDM6 1919 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 ZBTB14O43829 449 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 MAP3K6O95382 1288 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 HSPA1AP0DMV8 641 aaKnown RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 HSPA1BP0DMV9 641 aaKnown RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 CCR3P51677 355 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 DSG1Q02413 1049 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 POU6F1Q14863 301 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 ARHGAP22Q7Z5H3 698 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 TRAPPC5Q8IUR0 188 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 PLD3Q8IV08 490 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 SYTL1Q8IYJ3 562 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 C1orf127Q8N9H9 656 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 GRIN3AQ8TCU5 1115 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 ZNF333Q96JL9 665 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 MRPL1Q9BYD6 325 aaKnown RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 ILKAPQ9H0C8 392 aaPredicted RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 RMND5AQ9H871 391 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 PHPT1Q9NRX4 125 aaPredicted RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 GMIPQ9P107 970 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 AGO1Q9UL18 857 aaKnown RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 A0A1W2PQH9 124 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 BTNL10A8MVZ5 291 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 DNALI1O14645 258 aaPredicted RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 SNAI1O95863 264 aaPredicted RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 C4BPAP04003 597 aaKnown RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 RHOQP17081 205 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 SYN1P17600 705 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 AMD1P17707 334 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 HLA-DPA1P20036 260 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 CORO1AP31146 461 aaKnown RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 NCALDP61601 193 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 MKRN4PQ13434 485 aaPredicted RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 ADRM1Q16186 407 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 PAGE2BQ5JRK9 111 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 PCID2Q5JVF3 399 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 AFTPHQ6ULP2 937 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 DLK2Q6UY11 383 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 SUSD3Q96L08 255 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 SIKE1Q9BRV8 207 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 PABPC3Q9H361 631 aaKnown RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 ELAC1Q9H777 363 aaKnown RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 CERS4Q9HA82 394 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 GNPTGQ9UJJ9 305 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 GOLGA8RI6L899 631 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 FGF1P05230 155 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 FSHRP23945 695 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 MAPKAPK2P49137 400 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 RAET1GQ6H3X3 334 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 PTAR1Q7Z6K3 402 aaPredicted RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 CMTM5Q96DZ9 223 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 FCRL2Q96LA5 508 aaPredicted RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 ELOVL6Q9H5J4 265 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 VPS45Q9NRW7 570 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 PCDHGC3Q9UN70 934 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 A0A1B0GVM2 712 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 TCAF2A6NFQ2 919 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 SLC38A8A6NNN8 435 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 NRP1O14786 923 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 ACSL4O60488 711 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 KATNA1O75449 491 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 SKAP2O75563 359 aaPredicted RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 SUPT7LO94864 414 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 WDR47O94967 919 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 ARIH2O95376 493 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 SPATA31D3P0C874 917 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 CDH2P19022 906 aaPredicted RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 HSPA13P48723 471 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 INAVAQ3KP66 663 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 ZC3H12BQ5HYM0 836 aaKnown RBP11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 ARHGAP17Q68EM7 881 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms