RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 FBRSQ9HAH7 460 aa14.38□□□□□ -0.11
CMTM1-217ENST00000533666 POLMQ9NP87 494 aaPredicted RBP14.38□□□□□ -0.11
CMTM1-217ENST00000533666 UBA2Q9UBT2 640 aaPredicted RBP14.38□□□□□ -0.11
CMTM1-217ENST00000533666 MMP17Q9ULZ9 603 aa14.38□□□□□ -0.11
CMTM1-217ENST00000533666 STON1Q9Y6Q2 735 aa14.38□□□□□ -0.11
CMTM1-217ENST00000533666 EDDM13A0A1B0GTR0 161 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 PRR33A8MZF0 331 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 KIF2AO00139 706 aaPredicted RBP14.37□□□□□ -0.11
CMTM1-217ENST00000533666 MTSS1O43312 755 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 MFSD11O43934 449 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 CEP104O60308 925 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 SNAP91O60641 907 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 ALDH1A2O94788 518 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 PDGFBP01127 241 aaPredicted RBP14.37□□□□□ -0.11
CMTM1-217ENST00000533666 EPHX1P07099 455 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 HOXB2P14652 356 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 TCP1P17987 556 aaKnown RBP14.37□□□□□ -0.11
CMTM1-217ENST00000533666 CCNCP24863 283 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 GARSP41250 739 aaKnown RBP14.37□□□□□ -0.11
CMTM1-217ENST00000533666 CTSOP43234 321 aaPredicted RBP14.37□□□□□ -0.11
CMTM1-217ENST00000533666 SERPINH1P50454 418 aaKnown RBP14.37□□□□□ -0.11
CMTM1-217ENST00000533666 RENBPP51606 427 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 CCR3P51677 355 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 DGKEP52429 567 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 GBE1Q04446 702 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 FZD5Q13467 585 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 EMC10Q5UCC4 262 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 MAMSTRQ6ZN01 415 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 SYT13Q7L8C5 426 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 SFTPA1Q8IWL2 248 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 SH2D3CQ8N5H7 860 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 ISG20Q96AZ6 181 aaKnown RBP14.37□□□□□ -0.11
CMTM1-217ENST00000533666 RPL10LQ96L21 214 aaKnown RBP14.37□□□□□ -0.11
CMTM1-217ENST00000533666 TSGA13Q96PP4 275 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 GABRG3Q99928 467 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 FRMD8P1Q9BZ68 369 aaPredicted RBP14.37□□□□□ -0.11
CMTM1-217ENST00000533666 SPATA6Q9NWH7 488 aaPredicted RBP14.37□□□□□ -0.11
CMTM1-217ENST00000533666 CACNA2D2Q9NY47 1150 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 DTLQ9NZJ0 730 aa14.37□□□□□ -0.11
CMTM1-217ENST00000533666 TARSL2A2RTX5 802 aaKnown RBP14.36□□□□□ -0.11
CMTM1-217ENST00000533666 HACD1B0YJ81 288 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 CES2O00748 559 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 MCF2LO15068 1137 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 ATP9BO43861 1147 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 RNASEH1O60930 286 aaKnown RBP14.36□□□□□ -0.11
CMTM1-217ENST00000533666 ZMPSTE24O75844 475 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 CASQ1P31415 396 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 HSPA9P38646 679 aaKnown RBP14.36□□□□□ -0.11
CMTM1-217ENST00000533666 CXCL12P48061 93 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 NUBP1P53384 320 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 ETF1P62495 437 aaKnown RBP14.36□□□□□ -0.11
CMTM1-217ENST00000533666 XRCC4Q13426 336 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 ENPP2Q13822 863 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 LLGL1Q15334 1064 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 DLG2Q15700 870 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 PTPRNQ16849 979 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 HNRNPA1L2Q32P51 320 aaKnown RBP14.36□□□□□ -0.11
CMTM1-217ENST00000533666 LINGO4Q6UY18 593 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 Q6ZS52 159 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 DSG4Q86SJ6 1040 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 CCDC33Q8N5R6 958 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 PCDH20Q8N6Y1 951 aaKnown RBP14.36□□□□□ -0.11
CMTM1-217ENST00000533666 FATE1Q969F0 183 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 HDAC11Q96DB2 347 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 MRGPRX3Q96LB0 322 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 TMEM245Q9H330 911 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 HOMER3Q9NSC5 361 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 SEPT3Q9UH03 358 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 SNX12Q9UMY4 172 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 MFHAS1Q9Y4C4 1052 aa14.36□□□□□ -0.11
CMTM1-217ENST00000533666 DLL1O00548 723 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 LAMTOR5O43504 91 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 STK10O94804 968 aaKnown RBP14.35□□□□□ -0.11
CMTM1-217ENST00000533666 ATP1A1P05023 1023 aaKnown RBP14.35□□□□□ -0.11
CMTM1-217ENST00000533666 SRCP12931 536 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 PRLRP16471 622 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 GLDCP23378 1020 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 IL12RB1P42701 662 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 NUMBP49757 651 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 STK19P49842 368 aaPredicted RBP14.35□□□□□ -0.11
CMTM1-217ENST00000533666 SNRPD1P62314 119 aaKnown RBP14.35□□□□□ -0.11
CMTM1-217ENST00000533666 ARF5P84085 180 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 AP1B1Q10567 949 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 SFSWAPQ12872 951 aaKnown RBP14.35□□□□□ -0.11
CMTM1-217ENST00000533666 MTAPQ13126 283 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 ZNF235Q14590 738 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 MARC1Q5VT66 337 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 DCAF12L1Q5VU92 463 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 ZSCAN30Q86W11 494 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 SLC13A5Q86YT5 568 aaPredicted RBP14.35□□□□□ -0.11
CMTM1-217ENST00000533666 CCDC13Q8IYE1 715 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 C17orf53Q8N3J3 647 aaPredicted RBP14.35□□□□□ -0.11
CMTM1-217ENST00000533666 TFB1MQ8WVM0 346 aaKnown RBP14.35□□□□□ -0.11
CMTM1-217ENST00000533666 OSBPL9Q96SU4 736 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 CINPQ9BW66 212 aaPredicted RBP14.35□□□□□ -0.11
CMTM1-217ENST00000533666 AMACRQ9UHK6 382 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 SLCO3A1Q9UIG8 710 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 SAR1BQ9Y6B6 198 aa14.35□□□□□ -0.11
CMTM1-217ENST00000533666 SHROOM3Q8TF72 1996 aa14.34□□□□□ -0.11
CMTM1-217ENST00000533666 TTC34A8MYJ7 566 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms