RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 NT5DC3Q86UY8 548 aa14.89□□□□□ -0.03
SF3B2-214ENST00000533595 RCOR2Q8IZ40 523 aa14.89□□□□□ -0.03
SF3B2-214ENST00000533595 HMGB4Q8WW32 186 aa14.89□□□□□ -0.03
SF3B2-214ENST00000533595 RNF157Q96PX1 679 aa14.89□□□□□ -0.03
SF3B2-214ENST00000533595 MAK16Q9BXY0 300 aaKnown RBP14.89□□□□□ -0.03
SF3B2-214ENST00000533595 MTG2Q9H4K7 406 aa14.89□□□□□ -0.03
SF3B2-214ENST00000533595 PRSS16Q9NQE7 514 aa14.89□□□□□ -0.03
SF3B2-214ENST00000533595 BCCIPQ9P287 314 aaKnown RBP eCLIP14.89□□□□□ -0.03
SF3B2-214ENST00000533595 EBF1Q9UH73 591 aa14.89□□□□□ -0.03
SF3B2-214ENST00000533595 PCDHA3Q9Y5H8 950 aa14.89□□□□□ -0.03
SF3B2-214ENST00000533595 CCDC163A0A0D9SF12 145 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 TARSL2A2RTX5 802 aaKnown RBP14.88□□□□□ -0.03
SF3B2-214ENST00000533595 MIF4GDA9UHW6 222 aaKnown RBP14.88□□□□□ -0.03
SF3B2-214ENST00000533595 H0Y858 1186 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 K7ERQ8 282 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 ZSCAN12O43309 604 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 SERPINH1P50454 418 aaKnown RBP14.88□□□□□ -0.03
SF3B2-214ENST00000533595 TCF15Q12870 199 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 PAFAH1B3Q15102 231 aaKnown RBP14.88□□□□□ -0.03
SF3B2-214ENST00000533595 NCBP2-AS2Q69YL0 99 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 MFSD7Q6UXD7 560 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 RASSF3Q86WH2 238 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 PQLC3Q8N755 202 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 NETO2Q8NC67 525 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 EXD1Q8NHP7 514 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.88□□□□□ -0.03
SF3B2-214ENST00000533595 FRS2Q8WU20 508 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 RBM41Q96IZ5 413 aaKnown RBP14.88□□□□□ -0.03
SF3B2-214ENST00000533595 ALS2CR12Q96Q35 445 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 FBRSQ9HAH7 460 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 PRDM16Q9HAZ2 1276 aa14.88□□□□□ -0.03
SF3B2-214ENST00000533595 AXIN1O15169 862 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 SMAD6O43541 496 aaKnown RBP14.87□□□□□ -0.03
SF3B2-214ENST00000533595 PRAMEF11O60813 436 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 SIN3BO75182 1162 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 CD160O95971 181 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 ZFXP17010 805 aaPredicted RBP14.87□□□□□ -0.03
SF3B2-214ENST00000533595 GABRG2P18507 467 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 CDKN2BP42772 138 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 FNTBP49356 437 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 PTPN5P54829 565 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 RWDD2BP57060 319 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 DMWDQ09019 674 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 TAZQ16635 292 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 TFDP3Q5H9I0 405 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 C9orf64Q5T6V5 341 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 C22orf39Q6P5X5 142 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 LEKR1Q6ZMV7 388 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 SPOCD1Q6ZMY3 1216 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 METTL3Q86U44 580 aaKnown RBP14.87□□□□□ -0.03
SF3B2-214ENST00000533595 WDR5BQ86VZ2 330 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 LONP2Q86WA8 852 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 RFX6Q8HWS3 928 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 CCDC50Q8IVM0 306 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 TP53INP2Q8IXH6 220 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 PGBD3Q8N328 593 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 UBL4BQ8N7F7 174 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 MDGA1Q8NFP4 955 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 OR2T3Q8NH03 318 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 UBE2Q2Q8WVN8 375 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 CASKIN2Q8WXE0 1202 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 NELL1Q92832 810 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 PTPRN2Q92932 1015 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 CEP44Q9C0F1 390 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 IRF2BPLQ9H1B7 796 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 ZSCAN32Q9NX65 697 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 IPO11Q9UI26 975 aaKnown RBP14.87□□□□□ -0.03
SF3B2-214ENST00000533595 ACTL7AQ9Y615 435 aa14.87□□□□□ -0.03
SF3B2-214ENST00000533595 VPS13AQ96RL7 3174 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 J3KR12 359 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 APOL1O14791 398 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 MFSD11O43934 449 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 VAV1P15498 845 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 NDUFV2P19404 249 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 PEX5P50542 639 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 COPAP53621 1224 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 COPS2P61201 443 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 TFDP2Q14188 446 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 INO80DQ53TQ3 878 aaPredicted RBP14.86□□□□□ -0.03
SF3B2-214ENST00000533595 SLC9A4Q6AI14 798 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 Q6ZVU0 165 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 TMPRSS6Q8IU80 811 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 LRRC49Q8IUZ0 686 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 TRIM58Q8NG06 486 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 ALG3Q92685 438 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 ISG20Q96AZ6 181 aaKnown RBP14.86□□□□□ -0.03
SF3B2-214ENST00000533595 HES6Q96HZ4 224 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 MRGPRX1Q96LB2 322 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 CCDC114Q96M63 670 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 MKRN2Q9H000 416 aaKnown RBP14.86□□□□□ -0.03
SF3B2-214ENST00000533595 SLC6A17Q9H1V8 727 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 SP110Q9HB58 689 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 PDFQ9HBH1 243 aa14.86□□□□□ -0.03
SF3B2-214ENST00000533595 UBA2Q9UBT2 640 aaPredicted RBP14.86□□□□□ -0.03
SF3B2-214ENST00000533595 PACSIN2Q9UNF0 486 aaPredicted RBP14.86□□□□□ -0.03
SF3B2-214ENST00000533595 FCF1Q9Y324 198 aaKnown RBP14.86□□□□□ -0.03
SF3B2-214ENST00000533595 NYNRINQ9P2P1 1898 aaKnown RBP14.85□□□□□ -0.03
SF3B2-214ENST00000533595 hCG_1818297A0A087WSY0 165 aa14.85□□□□□ -0.03
SF3B2-214ENST00000533595 BNIP3LO60238 219 aa14.85□□□□□ -0.03
SF3B2-214ENST00000533595 RNASEH1O60930 286 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms