RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 CDC25BP30305 580 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 KLK7P49862 253 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 CCT8P50990 548 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 JAM2P57087 298 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 PPP2CBP62714 309 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 PPP2CAP67775 309 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 UBXN1Q04323 297 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 SUZ12Q15022 739 aaKnown RBP11.6□□□□□ -0.55
CLCF1-202ENST00000533438 DLG2Q15700 870 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 ACBD5Q5T8D3 534 aaPredicted RBP11.6□□□□□ -0.55
CLCF1-202ENST00000533438 Q6ZVU0 165 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 ADAT2Q7Z6V5 191 aaKnown RBP11.6□□□□□ -0.55
CLCF1-202ENST00000533438 SETD3Q86TU7 594 aaPredicted RBP11.6□□□□□ -0.55
CLCF1-202ENST00000533438 ZNF677Q86XU0 584 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 PNPLA1Q8N8W4 532 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 RHBDD1Q8TEB9 315 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 CPA5Q8WXQ8 436 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 OR8D1Q8WZ84 308 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 C1orf74Q96LT6 269 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 CFAP57Q96MR6 1250 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 ACE2Q9BYF1 805 aaPredicted RBP11.6□□□□□ -0.55
CLCF1-202ENST00000533438 MUC3BQ9H195 1237 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 KDM4CQ9H3R0 1056 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 ARHGAP20Q9P2F6 1191 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 ZNF212Q9UDV6 495 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 NOCTQ9UK39 431 aaKnown RBP11.6□□□□□ -0.55
CLCF1-202ENST00000533438 VPS28Q9UK41 221 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 PPM1HQ9ULR3 514 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 APOBEC2Q9Y235 224 aaKnown RBP11.6□□□□□ -0.55
CLCF1-202ENST00000533438 PAXBP1Q9Y5B6 917 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 SNX10Q9Y5X0 201 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 TBC1D3DA0A087WVF3 549 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 TBC1D3IA0A087WXS9 549 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 TBC1D3EA0A087X179 549 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 TBC1D3KA0A087X1G2 549 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 A0A1B0GTQ1 180 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 TBC1D3FA6NER0 549 aaPredicted RBP11.59□□□□□ -0.55
CLCF1-202ENST00000533438 TBC1D3LB9A6J9 549 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 E9PAM4 449 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 PLK4O00444 970 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 EPHB6O15197 1021 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 PLRG1O43660 514 aaKnown RBP11.59□□□□□ -0.55
CLCF1-202ENST00000533438 DFNA5O60443 496 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 SNAP91O60641 907 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 GFPT2O94808 682 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 ENDOD1O94919 500 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 MT-CO1P00395 513 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 TBC1D3HP0C7X1 549 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 CHRNB2P17787 502 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 C21orf59P57076 290 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 KRT83P78385 493 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 FMO1Q01740 532 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 ACCSLQ4AC99 568 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 AGBL4Q5VU57 503 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 FAM46CQ5VWP2 391 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 NAA35Q5VZE5 725 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 TBC1D3GQ6DHY5 549 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 TBC1D3CQ6IPX1 549 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.59□□□□□ -0.55
CLCF1-202ENST00000533438 DSG4Q86SJ6 1040 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 VSTM4Q8IW00 320 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 TBC1D3Q8IZP1 549 aaPredicted RBP11.59□□□□□ -0.55
CLCF1-202ENST00000533438 DCAF4L2Q8NA75 395 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 MSANTD4Q8NCY6 345 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 PIP4K2CQ8TBX8 421 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 SLC20A1Q8WUM9 679 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 ANP32BQ92688 251 aaKnown RBP11.59□□□□□ -0.55
CLCF1-202ENST00000533438 HAPLN3Q96S86 360 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 CDC6Q99741 560 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 MPP6Q9NZW5 540 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 DKK4Q9UBT3 224 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 VPS51Q9UID3 782 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 SIK3Q9Y2K2 1263 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 DAAM1Q9Y4D1 1078 aa11.59□□□□□ -0.55
CLCF1-202ENST00000533438 A0A0D9SEW6 157 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 C1QTNF3-AMACRE9PGA6 284 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 GOLGA8SH3BPF8 625 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 RTN2O75298 545 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 CTSLP07711 333 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 RHOCP08134 193 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 ATXN1LP0C7T5 689 aaKnown RBP11.58□□□□□ -0.56
CLCF1-202ENST00000533438 MMP8P22894 467 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 SOX5P35711 763 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 GRK6P43250 576 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 POLR2FP61218 127 aaKnown RBP11.58□□□□□ -0.56
CLCF1-202ENST00000533438 CDR2Q01850 454 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 CNTN1Q12860 1018 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 SHBQ15464 509 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 RAB6CQ53S08 254 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 LRRC31Q6UY01 552 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 TRIM69Q86WT6 500 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 FAM131BQ86XD5 332 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 EMC1Q8N766 993 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 OR2A12Q8NGT7 310 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 SKA1Q96BD8 255 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 ELF4Q99607 663 aaPredicted RBP11.58□□□□□ -0.56
CLCF1-202ENST00000533438 C2orf49Q9BVC5 232 aaPredicted RBP11.58□□□□□ -0.56
CLCF1-202ENST00000533438 RAB6CQ9H0N0 254 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 NLRC4Q9NPP4 1024 aa11.58□□□□□ -0.56
CLCF1-202ENST00000533438 AASDHPPTQ9NRN7 309 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms