RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 DAAM2Q86T65 1068 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 METTL3Q86U44 580 aaKnown RBP12.24□□□□□ -0.45
SSBP3-214ENST00000533209 TMPRSS6Q8IU80 811 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 MAP7D3Q8IWC1 876 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 TP53INP2Q8IXH6 220 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 STK40Q8N2I9 435 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 PGBD3Q8N328 593 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 TXLNBQ8N3L3 684 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 LZTR1Q8N653 840 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 LRRC57Q8N9N7 239 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 PCDH19Q8TAB3 1148 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 GAB3Q8WWW8 586 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 RLN3Q8WXF3 142 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 FAM129BQ96TA1 746 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 ZNF670Q9BS34 389 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 PRDM16Q9HAZ2 1276 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 HPCAL4Q9UM19 191 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 INVSQ9Y283 1065 aa12.24□□□□□ -0.45
SSBP3-214ENST00000533209 CKAP5Q14008 2032 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 MACROD2A1Z1Q3 448 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 LRRD1A4D1F6 860 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 GRID2IPA4D2P6 1211 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 ARHGAP42A6NI28 874 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 ZNF487B1APH4 448 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 PROB1E7EW31 1015 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 J3KR12 359 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 PSTPIP1O43586 416 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 PRAMEF11O60813 436 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 RPP40O75818 363 aaKnown RBP12.23□□□□□ -0.45
SSBP3-214ENST00000533209 KRT1P04264 644 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 NAP1L1P55209 391 aaKnown RBP12.23□□□□□ -0.45
SSBP3-214ENST00000533209 GEMIN4P57678 1058 aaKnown RBP12.23□□□□□ -0.45
SSBP3-214ENST00000533209 RPS14P62263 151 aaKnown RBP12.23□□□□□ -0.45
SSBP3-214ENST00000533209 ANKRD20A8PQ5CZ79 823 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 ZFYVE27Q5T4F4 411 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 NCBP2-AS2Q69YL0 99 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 C22orf39Q6P5X5 142 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 LEKR1Q6ZMV7 388 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 VSIG1Q86XK7 387 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 ZNF354CQ86Y25 554 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 CACUL1Q86Y37 369 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 PQLC3Q8N755 202 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 FRMD1Q8N878 549 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 OR2A12Q8NGT7 310 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 PRCCQ92733 491 aaPredicted RBP12.23□□□□□ -0.45
SSBP3-214ENST00000533209 SIPA1Q96FS4 1042 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 RSPH9Q9H1X1 276 aaPredicted RBP12.23□□□□□ -0.45
SSBP3-214ENST00000533209 EPC1Q9H2F5 836 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 PDFQ9HBH1 243 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 CD93Q9NPY3 652 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 DDX56Q9NY93 547 aaKnown RBP12.23□□□□□ -0.45
SSBP3-214ENST00000533209 USP36Q9P275 1121 aaKnown RBP12.23□□□□□ -0.45
SSBP3-214ENST00000533209 FCF1Q9Y324 198 aaKnown RBP12.23□□□□□ -0.45
SSBP3-214ENST00000533209 GPR179Q6PRD1 2367 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 CHD5Q8TDI0 1954 aa12.23□□□□□ -0.45
SSBP3-214ENST00000533209 ZSCAN5CA6NGD5 496 aaPredicted RBP12.22□□□□□ -0.45
SSBP3-214ENST00000533209 DFFAO00273 331 aa12.22□□□□□ -0.45
SSBP3-214ENST00000533209 ZNF217O75362 1048 aa12.22□□□□□ -0.45
SSBP3-214ENST00000533209 BCKDHBP21953 392 aa12.22□□□□□ -0.45
SSBP3-214ENST00000533209 MARCKSL1P49006 195 aa12.22□□□□□ -0.45
SSBP3-214ENST00000533209 ELAVL3Q14576 367 aaKnown RBP12.22□□□□□ -0.45
SSBP3-214ENST00000533209 PAFAH1B3Q15102 231 aaKnown RBP12.22□□□□□ -0.45
SSBP3-214ENST00000533209 INO80DQ53TQ3 878 aaPredicted RBP12.22□□□□□ -0.45
SSBP3-214ENST00000533209 ZNF776Q68DI1 518 aaPredicted RBP12.22□□□□□ -0.45
SSBP3-214ENST00000533209 ARHGAP36Q6ZRI8 547 aa12.22□□□□□ -0.45
SSBP3-214ENST00000533209 FAM160A2Q8N612 972 aaPredicted RBP12.22□□□□□ -0.45
SSBP3-214ENST00000533209 PCDH20Q8N6Y1 951 aaKnown RBP12.22□□□□□ -0.45
SSBP3-214ENST00000533209 SUMF1Q8NBK3 374 aa12.22□□□□□ -0.45
SSBP3-214ENST00000533209 KIAA1524Q8TCG1 905 aa12.22□□□□□ -0.45
SSBP3-214ENST00000533209 ANP32BQ92688 251 aaKnown RBP12.22□□□□□ -0.45
SSBP3-214ENST00000533209 KRT35Q92764 455 aa12.22□□□□□ -0.45
SSBP3-214ENST00000533209 ISG20Q96AZ6 181 aaKnown RBP12.22□□□□□ -0.45
SSBP3-214ENST00000533209 RNF25Q96BH1 459 aaPredicted RBP12.22□□□□□ -0.45
SSBP3-214ENST00000533209 RNF157Q96PX1 679 aa12.22□□□□□ -0.45
SSBP3-214ENST00000533209 CEP44Q9C0F1 390 aa12.22□□□□□ -0.45
SSBP3-214ENST00000533209 TNKS2Q9H2K2 1166 aa12.22□□□□□ -0.45
SSBP3-214ENST00000533209 SEMA4AQ9H3S1 761 aa12.22□□□□□ -0.45
SSBP3-214ENST00000533209 ITM2CQ9NQX7 267 aa12.22□□□□□ -0.45
SSBP3-214ENST00000533209 MBD1Q9UIS9 605 aaPredicted RBP12.22□□□□□ -0.45
SSBP3-214ENST00000533209 FANCMQ8IYD8 2048 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 WDR87Q6ZQQ6 2873 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 ZFHX2Q9C0A1 2572 aaPredicted RBP12.21□□□□□ -0.45
SSBP3-214ENST00000533209 IGHV1OR15-9A0A0B4J2B8 117 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 MCF2LO15068 1137 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 ALOX15BO15296 676 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 NRDCO43847 1150 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 MFSD11O43934 449 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 BNIP3LO60238 219 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 RNASEH1O60930 286 aaKnown RBP12.21□□□□□ -0.45
SSBP3-214ENST00000533209 PALMO75781 387 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 TMCC1O94876 653 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 IGLV3-19P01714 112 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 CCDC175P0C221 793 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 ACADMP11310 421 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 CTNNA1P35221 906 aaKnown RBP12.21□□□□□ -0.45
SSBP3-214ENST00000533209 SERPINB6P35237 376 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 TPMTP51580 245 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 ZBTB16Q05516 673 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 BYSLQ13895 437 aaKnown RBP12.21□□□□□ -0.45
SSBP3-214ENST00000533209 SIM2Q14190 667 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms