RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SLC39A8Q9C0K1 460 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 NOL6Q9H6R4 1146 aaKnown RBP18.89■□□□□ 0.61
SMPD1-208ENST00000533123 TBC1D14Q9P2M4 693 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 A0A1B0GVM2 712 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 TCAF2A6NFQ2 919 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 HMGB1P1B2RPK0 211 aaPredicted RBP18.89■□□□□ 0.61
SMPD1-208ENST00000533123 DFFAO00273 331 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 AP1B1Q10567 949 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 PRKD1Q15139 912 aaPredicted RBP18.89■□□□□ 0.61
SMPD1-208ENST00000533123 CENPUQ71F23 418 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 BZW1Q7L1Q6 419 aaKnown RBP18.89■□□□□ 0.61
SMPD1-208ENST00000533123 ANKMY2Q8IV38 441 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 ADGRG2Q8IZP9 1017 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 LZTR1Q8N653 840 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 HJURPQ8NCD3 748 aaPredicted RBP18.89■□□□□ 0.61
SMPD1-208ENST00000533123 HTR3CQ8WXA8 447 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 ZFYVE19Q96K21 471 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 CEP41Q9BYV8 373 aa18.89■□□□□ 0.61
SMPD1-208ENST00000533123 DENND4AQ7Z401 1863 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 TYW5A2RUC4 315 aaKnown RBP18.88■□□□□ 0.61
SMPD1-208ENST00000533123 NDC80O14777 642 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 CLDN11O75508 207 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 METTL18O95568 372 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 PPARDQ03181 441 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 LONRF1Q17RB8 773 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 TRIM68Q6AZZ1 485 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 CAPN12Q6ZSI9 719 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 UMODL1-AS1Q8N2C9 162 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 CCNYQ8ND76 341 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 OR52K2Q8NGK3 314 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 FGF14Q92915 247 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 WDR83Q9BRX9 315 aaKnown RBP18.88■□□□□ 0.61
SMPD1-208ENST00000533123 DUS2Q9NX74 493 aaKnown RBP18.88■□□□□ 0.61
SMPD1-208ENST00000533123 NOVA2Q9UNW9 492 aaKnown RBP18.88■□□□□ 0.61
SMPD1-208ENST00000533123 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.88■□□□□ 0.61
SMPD1-208ENST00000533123 VGLL3A8MV65 326 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 F5H423 210 aaPredicted RBP18.88■□□□□ 0.61
SMPD1-208ENST00000533123 GCATO75600 419 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 ARL4CP56559 192 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 ZNF177Q13360 481 aaPredicted RBP18.88■□□□□ 0.61
SMPD1-208ENST00000533123 PDK1Q15118 436 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 MPPE1Q53F39 396 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 TTC39BQ5VTQ0 682 aaPredicted RBP18.88■□□□□ 0.61
SMPD1-208ENST00000533123 PARM1Q6UWI2 310 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 CARNMT1Q8N4J0 409 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 DEPDC1BQ8WUY9 529 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 ASIC4Q96FT7 647 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 ETNK1Q9HBU6 452 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 DONSONQ9NYP3 566 aa18.88■□□□□ 0.61
SMPD1-208ENST00000533123 HACD1B0YJ81 288 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 HPDP32754 393 aaPredicted RBP18.87■□□□□ 0.61
SMPD1-208ENST00000533123 MAPKAPK2P49137 400 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 ATP1A2P50993 1020 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 GALNT2Q10471 571 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 LY6G5CQ5SRR4 150 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 AFMIDQ63HM1 303 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 VITQ6UXI7 678 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 ARHGAP36Q6ZRI8 547 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 CHST9Q7L1S5 443 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 OSCP1Q8WVF1 389 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 IRF7Q92985 503 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 HLA-CQ95604 372 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 KXD1Q9BQD3 176 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 PLA2G2FQ9BZM2 168 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 SEPT10Q9P0V9 454 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 CLEC4EQ9ULY5 219 aa18.87■□□□□ 0.61
SMPD1-208ENST00000533123 A0A0D9SEW6 157 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 C5orf60A6NFR6 353 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 H0Y626 953 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 MYO1CO00159 1063 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 RNF103O00237 685 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 SLC9A3R1O14745 358 aaPredicted RBP18.86■□□□□ 0.61
SMPD1-208ENST00000533123 RASGRF2O14827 1237 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 CHADO15335 359 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 RAMP2O60895 175 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 CYBBP04839 570 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 HOXD9P28356 352 aaPredicted RBP18.86■□□□□ 0.61
SMPD1-208ENST00000533123 GARSP41250 739 aaKnown RBP18.86■□□□□ 0.61
SMPD1-208ENST00000533123 PAPOLAP51003 745 aaKnown RBP18.86■□□□□ 0.61
SMPD1-208ENST00000533123 NDST2P52849 883 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 POLD3Q15054 466 aaPredicted RBP18.86■□□□□ 0.61
SMPD1-208ENST00000533123 ANO4Q32M45 955 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 FSCBQ5H9T9 825 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 FYB2Q5VWT5 728 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 CEP128Q6ZU80 1094 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 OTUB2Q96DC9 234 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 HMCESQ96FZ2 354 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 RPP25Q9BUL9 199 aaKnown RBP18.86■□□□□ 0.61
SMPD1-208ENST00000533123 SPHK2Q9NRA0 654 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 OBP2AQ9NY56 170 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 RAD54BQ9Y620 910 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 NEDD8-MDP1E9PL57 170 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 PPP1R12AO14974 1030 aaPredicted RBP18.86■□□□□ 0.61
SMPD1-208ENST00000533123 ALOX15BO15296 676 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 MBTPS2O43462 519 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 AVILO75366 819 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 APRTP07741 180 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 NR1D1P20393 614 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 MX2P20592 715 aa18.86■□□□□ 0.61
SMPD1-208ENST00000533123 MAGOHP61326 146 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms