RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 TTC34A8MYJ7 566 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 ATP9BO43861 1147 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 ADAM23O75077 832 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 TJP3O95049 919 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 MT-CO1P00395 513 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 EPHX1P07099 455 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 CHRM1P11229 460 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 SRCP12931 536 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 TGM2P21980 687 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 NR2C2P49116 596 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 STK19P49842 368 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 DGKEP52429 567 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 NUBP1P53384 320 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 GNG11P61952 73 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 DYNLT1P63172 113 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 IL10RBQ08334 325 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 ZNF211Q13398 564 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 DLG2Q15700 870 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 CRY1Q16526 586 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 HNRNPA1L2Q32P51 320 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 INO80DQ53TQ3 878 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 CCDC181Q5TID7 509 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 SLC35F6Q8N357 371 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 SH2D3CQ8N5H7 860 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 CAMKK1Q8N5S9 505 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 NETO2Q8NC67 525 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 NSMCE1Q8WV22 266 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 CASKIN2Q8WXE0 1202 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 P3H4Q92791 437 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 MYO19Q96H55 970 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 SP110Q9HB58 689 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 NCOR1O75376 2440 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 TECTAO75443 2155 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 F5P12259 2224 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 J3KR12 359 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 K7ERQ8 282 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 KIF2AO00139 706 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 KCNK3O14649 394 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 ENC1O14682 589 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 MFSD11O43934 449 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 PRAMEF11O60813 436 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 ALDH1A2O94788 518 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 TUBB4AP04350 444 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 HLA-EP13747 358 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 PRKCHP24723 683 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 PTPN7P35236 360 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 SERPINH1P50454 418 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 SATB1Q01826 763 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 GBE1Q04446 702 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 GALNT2Q10471 571 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 SLC10A2Q12908 348 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 PDK1Q15118 436 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 SEL1L2Q5TEA6 688 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 TMEM92Q6UXU6 159 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 LEKR1Q6ZMV7 388 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 TP53INP2Q8IXH6 220 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 ATPAF2Q8N5M1 289 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 CCNYQ8ND76 341 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 ISG20Q96AZ6 181 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 ZNF599Q96NL3 588 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 TLR10Q9BXR5 811 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 CEP44Q9C0F1 390 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 CARD9Q9H257 536 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 POLR3BQ9NW08 1133 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 DTLQ9NZJ0 730 aa11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 UBA2Q9UBT2 640 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 FARP1Q9Y4F1 1045 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-211ENST00000533012 EDDM13A0A1B0GTR0 161 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 A0A1W2PQF6 199 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 PPP1R12AO14974 1030 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 SMAD6O43541 496 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 MAFKO60675 156 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 PAPSS2O95340 614 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 MAP3K6O95382 1288 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 APBB3O95704 486 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 CD160O95971 181 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 CCNCP24863 283 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 GARSP41250 739 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 RECQLP46063 649 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 ADCY2Q08462 1091 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 CAMK2GQ13555 558 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 RFTN1Q14699 578 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 TMCO4Q5TGY1 634 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 DCAF12L1Q5VU92 463 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 TIGD7Q6NT04 549 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 AADACL2Q6P093 401 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 NPNTQ6UXI9 565 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 ARHGAP36Q6ZRI8 547 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 BBS12Q6ZW61 710 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 PCDH20Q8N6Y1 951 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 ZNF366Q8N895 744 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 TSTD1Q8NFU3 115 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 FRS2Q8WU20 508 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 PTPRN2Q92932 1015 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 CCDC114Q96M63 670 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 TSGA13Q96PP4 275 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 BRD8Q9H0E9 1235 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 PRSS16Q9NQE7 514 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 C2orf42Q9NWW7 574 aa11.45□□□□□ -0.58
TRAPPC4-211ENST00000533012 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms