RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 RRP15Q9Y3B9 282 aaKnown RBP12.52□□□□□ -0.41
CHD7-211ENST00000532149 PCDHB12Q9Y5F1 795 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 RPS6KL1Q9Y6S9 549 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 GREB1Q4ZG55 1949 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 ZNF638Q14966 1978 aaKnown RBP12.52□□□□□ -0.41
CHD7-211ENST00000532149 SLC12A8A0AV02 714 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 WDR27A2RRH5 827 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 F8W810 466 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 RAMP2O60895 175 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 GLRA3O75311 464 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 CLDN11O75508 207 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 DCTN3O75935 186 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 MAP3K6O95382 1288 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 FGF19O95750 216 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 MPOP05164 745 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 APOA4P06727 396 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 DHRS4L1P0CG22 281 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 HOXB8P17481 243 aaPredicted RBP12.51□□□□□ -0.41
CHD7-211ENST00000532149 NFKB1P19838 968 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 TAC1P20366 129 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 ADRA1DP25100 572 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 RPA3P35244 121 aaPredicted RBP12.51□□□□□ -0.41
CHD7-211ENST00000532149 PRKAA2P54646 552 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 EPHB3P54753 998 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 CDH4P55283 916 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 CCL23P55773 120 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 OXCT1P55809 520 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 NIPAL4Q0D2K0 466 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 SPOUT1Q5T280 376 aaKnown RBP12.51□□□□□ -0.41
CHD7-211ENST00000532149 RNF43Q68DV7 783 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 CAPN12Q6ZSI9 719 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 KIAA0408Q6ZU52 694 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 SH2D5Q6ZV89 423 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 SPATA21Q7Z572 469 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 NECAB2Q7Z6G3 386 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 GALNT7Q86SF2 657 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 SETD3Q86TU7 594 aaPredicted RBP12.51□□□□□ -0.41
CHD7-211ENST00000532149 METTL3Q86U44 580 aaKnown RBP12.51□□□□□ -0.41
CHD7-211ENST00000532149 HERC6Q8IVU3 1022 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 PPHLN1Q8NEY8 458 aaKnown RBP12.51□□□□□ -0.41
CHD7-211ENST00000532149 PPM1EQ8WY54 764 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 ISL2Q96A47 359 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 OXNAD1Q96HP4 312 aaPredicted RBP12.51□□□□□ -0.41
CHD7-211ENST00000532149 SCLYQ96I15 445 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 TBL1YQ9BQ87 522 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 SLC39A8Q9C0K1 460 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 NACA2Q9H009 215 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 TMPRSS4Q9NRS4 437 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 MRPL17Q9NRX2 175 aaKnown RBP12.51□□□□□ -0.41
CHD7-211ENST00000532149 PRKAG3Q9UGI9 489 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 ZMYM5Q9UJ78 669 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 RIMKLBQ9ULI2 386 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 PLLPQ9Y342 182 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 MFHAS1Q9Y4C4 1052 aa12.51□□□□□ -0.41
CHD7-211ENST00000532149 ARIH1Q9Y4X5 557 aaPredicted RBP12.51□□□□□ -0.41
CHD7-211ENST00000532149 MYO18AQ92614 2054 aaKnown RBP12.5□□□□□ -0.41
CHD7-211ENST00000532149 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.5□□□□□ -0.41
CHD7-211ENST00000532149 TYW5A2RUC4 315 aaKnown RBP12.5□□□□□ -0.41
CHD7-211ENST00000532149 CCT8L1PA6NM43 557 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 TRIM49D1C9J1S8 452 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 ACSL4O60488 711 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 HNRNPCL1O60812 293 aaKnown RBP12.5□□□□□ -0.41
CHD7-211ENST00000532149 H2AFYO75367 372 aaKnown RBP12.5□□□□□ -0.41
CHD7-211ENST00000532149 BANF1O75531 89 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 COL6A2P12110 1019 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 MGAT1P26572 445 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 CD68P34810 354 aaPredicted RBP12.5□□□□□ -0.41
CHD7-211ENST00000532149 OR1D2P34982 312 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 PAPOLAP51003 745 aaKnown RBP12.5□□□□□ -0.41
CHD7-211ENST00000532149 NEK3P51956 506 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 NRLP54845 237 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 ARPP19P56211 112 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 WDR4P57081 412 aaKnown RBP12.5□□□□□ -0.41
CHD7-211ENST00000532149 SESN2P58004 480 aaPredicted RBP12.5□□□□□ -0.41
CHD7-211ENST00000532149 MPP2Q14168 576 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 SETDB1Q15047 1291 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 POLD3Q15054 466 aaPredicted RBP12.5□□□□□ -0.41
CHD7-211ENST00000532149 CCDC153Q494R4 210 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 ANKRD20A4Q4UJ75 823 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 RALGPS1Q5JS13 557 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 PIK3R6Q5UE93 754 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 LVRNQ6Q4G3 990 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 TAB3Q8N5C8 712 aaPredicted RBP12.5□□□□□ -0.41
CHD7-211ENST00000532149 TCP10LQ8TDR4 215 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 ZNF512Q96ME7 567 aaPredicted RBP12.5□□□□□ -0.41
CHD7-211ENST00000532149 RPRD1AQ96P16 312 aaPredicted RBP12.5□□□□□ -0.41
CHD7-211ENST00000532149 PGLYRP2Q96PD5 576 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 FSD1LQ9BXM9 530 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 PPP1R12CQ9BZL4 782 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 RASSF4Q9H2L5 321 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 SP110Q9HB58 689 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 TRPC7Q9HCX4 862 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 RBM22Q9NW64 420 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHD7-211ENST00000532149 STOML2Q9UJZ1 356 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 ANKRD6Q9Y2G4 727 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 USH1CQ9Y6N9 552 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 LTBP2Q14767 1821 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 DOCK4Q8N1I0 1966 aa12.5□□□□□ -0.41
CHD7-211ENST00000532149 DNAH12Q6ZR08 3092 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 A0A1W2PPM1 405 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms