RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 CLEC4EQ9ULY5 219 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 STARD13Q9Y3M8 1113 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 COL6A3P12111 3177 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 C5orf42Q9H799 3197 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 HACD1B0YJ81 288 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 RASA4BC9J798 803 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 PGRMC1O00264 195 aaKnown RBP12.79□□□□□ -0.36
COPB1-208ENST00000532088 PPP1R12AO14974 1030 aaPredicted RBP12.79□□□□□ -0.36
COPB1-208ENST00000532088 NPC1O15118 1278 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 RASA4O43374 803 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 KDELR3O43731 214 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 MFSD11O43934 449 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 FGGP02679 453 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 APODP05090 189 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 CXCR5P32302 372 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 CSKP41240 450 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 TNFRSF4P43489 277 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 GEMIN4P57678 1058 aaKnown RBP12.79□□□□□ -0.36
COPB1-208ENST00000532088 SLC20A2Q08357 652 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 SERINC3Q13530 473 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 PDK1Q15118 436 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 NOMO1Q15155 1222 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 TMEM196Q5HYL7 178 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 PITRM1Q5JRX3 1037 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 TMCO4Q5TGY1 634 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 RNF219Q5W0B1 726 aaPredicted RBP12.79□□□□□ -0.36
COPB1-208ENST00000532088 AADACL2Q6P093 401 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 DRICH1Q6PGQ1 229 aaPredicted RBP12.79□□□□□ -0.36
COPB1-208ENST00000532088 KDM1BQ8NB78 822 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 OR52K2Q8NGK3 314 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 CASKIN2Q8WXE0 1202 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 BHMTQ93088 406 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 HDAC11Q96DB2 347 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 OLFM3Q96PB7 478 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 TSGA13Q96PP4 275 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 P2RY13Q9BPV8 354 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 HEMGNQ9BXL5 484 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 MUC3BQ9H195 1237 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 HEBP1Q9NRV9 189 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 ABCB8Q9NUT2 735 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 MYO10Q9HD67 2058 aa12.79□□□□□ -0.36
COPB1-208ENST00000532088 A0A0D9SEW6 157 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 KAT7O95251 611 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 SRPRAP08240 638 aaKnown RBP12.78□□□□□ -0.36
COPB1-208ENST00000532088 CD70P32970 193 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 GARSP41250 739 aaKnown RBP12.78□□□□□ -0.36
COPB1-208ENST00000532088 SLC6A11P48066 632 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 GALK1P51570 392 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 STARD6P59095 220 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 GBE1Q04446 702 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 IL10RBQ08334 325 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 ADCY2Q08462 1091 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 GRSF1Q12849 480 aaKnown RBP eCLIP12.78□□□□□ -0.36
COPB1-208ENST00000532088 RFTN1Q14699 578 aaPredicted RBP12.78□□□□□ -0.36
COPB1-208ENST00000532088 LONRF2Q1L5Z9 754 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 FBXO43Q4G163 708 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 TIGD7Q6NT04 549 aaPredicted RBP12.78□□□□□ -0.36
COPB1-208ENST00000532088 ZNF852Q6ZMS4 543 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 ADIPOR2Q86V24 386 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 CREG2Q8IUH2 290 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 NAT16Q8N8M0 369 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 COG1Q8WTW3 980 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 UCMAQ8WVF2 138 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 HMCESQ96FZ2 354 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 ZNF599Q96NL3 588 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 UHRF1Q96T88 793 aaPredicted RBP12.78□□□□□ -0.36
COPB1-208ENST00000532088 NELL2Q99435 816 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 HERPUD2Q9BSE4 406 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 SLC39A8Q9C0K1 460 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 ARHGEF3Q9NR81 526 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 VPS28Q9UK41 221 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 INTS6Q9UL03 887 aaKnown RBP12.78□□□□□ -0.36
COPB1-208ENST00000532088 HPCAL4Q9UM19 191 aa12.78□□□□□ -0.36
COPB1-208ENST00000532088 MRPS17Q9Y2R5 130 aaKnown RBP12.78□□□□□ -0.36
COPB1-208ENST00000532088 MYOFQ9NZM1 2061 aa12.77□□□□□ -0.36
COPB1-208ENST00000532088 SHISA7A6NL88 538 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 MCF2LO15068 1137 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 MTSS1O43312 755 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 MAFKO60675 156 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 PRAMEF11O60813 436 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 ZMPSTE24O75844 475 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 ATP5BP06576 529 aaKnown RBP12.77□□□□□ -0.37
COPB1-208ENST00000532088 POLR2EP19388 210 aaKnown RBP12.77□□□□□ -0.37
COPB1-208ENST00000532088 CCNCP24863 283 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 MZF1P28698 734 aaPredicted RBP12.77□□□□□ -0.37
COPB1-208ENST00000532088 PAFAH1B1P43034 410 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 SOX9P48436 509 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 PAPOLAP51003 745 aaKnown RBP12.77□□□□□ -0.37
COPB1-208ENST00000532088 DYNLT1P63172 113 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 ZXDAP98168 799 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 OTUD4Q01804 1114 aaKnown RBP12.77□□□□□ -0.37
COPB1-208ENST00000532088 PPIDQ08752 370 aaKnown RBP12.77□□□□□ -0.37
COPB1-208ENST00000532088 SLC10A2Q12908 348 aaPredicted RBP12.77□□□□□ -0.37
COPB1-208ENST00000532088 SIX1Q15475 284 aaPredicted RBP12.77□□□□□ -0.37
COPB1-208ENST00000532088 CCNG2Q16589 344 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 GEN1Q17RS7 908 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 FUT11Q495W5 492 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 HSF5Q4G112 596 aaPredicted RBP12.77□□□□□ -0.37
COPB1-208ENST00000532088 CCDC181Q5TID7 509 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 MBLAC2Q68D91 279 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms