RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 PRRX2Q99811 253 aa22.75■■□□□ 1.23
LRRK1-208ENST00000532029 SP110Q9HB58 689 aa22.75■■□□□ 1.23
LRRK1-208ENST00000532029 FBXO4Q9UKT5 387 aa22.75■■□□□ 1.23
LRRK1-208ENST00000532029 MUC22E2RYF6 1773 aaPredicted RBP22.75■■□□□ 1.23
LRRK1-208ENST00000532029 ATG2BQ96BY7 2078 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 EDDM13A0A1B0GTR0 161 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 A0A1W2PQF6 199 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 TCRBV21S2A2A0A5A6 115 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 DDX3YO15523 660 aaKnown RBP22.74■■□□□ 1.23
LRRK1-208ENST00000532029 ATP9BO43861 1147 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 MFSD11O43934 449 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 APBB3O95704 486 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 MT-CO1P00395 513 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 SRCP12931 536 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 SERPINH1P50454 418 aaKnown RBP22.74■■□□□ 1.23
LRRK1-208ENST00000532029 ANGPT1Q15389 498 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 PPP2R5EQ16537 467 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 TAZQ16635 292 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 SLC9A4Q6AI14 798 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 ATPAF2Q8N5M1 289 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 ALG3Q92685 438 aa22.74■■□□□ 1.23
LRRK1-208ENST00000532029 BCCIPQ9P287 314 aaKnown RBP eCLIP22.74■■□□□ 1.23
LRRK1-208ENST00000532029 IPO11Q9UI26 975 aaKnown RBP22.74■■□□□ 1.23
LRRK1-208ENST00000532029 hCG_1818297A0A087WSY0 165 aa22.73■■□□□ 1.23
LRRK1-208ENST00000532029 TARSL2A2RTX5 802 aaKnown RBP22.73■■□□□ 1.23
LRRK1-208ENST00000532029 PRAMEF11O60813 436 aa22.73■■□□□ 1.23
LRRK1-208ENST00000532029 KRT10P13645 584 aa22.73■■□□□ 1.23
LRRK1-208ENST00000532029 DYNLT1P63172 113 aa22.73■■□□□ 1.23
LRRK1-208ENST00000532029 LLGL1Q15334 1064 aa22.73■■□□□ 1.23
LRRK1-208ENST00000532029 RPS6KA1Q15418 735 aa22.73■■□□□ 1.23
LRRK1-208ENST00000532029 MEI1Q5TIA1 1274 aa22.73■■□□□ 1.23
LRRK1-208ENST00000532029 KIAA1211LQ6NV74 962 aa22.73■■□□□ 1.23
LRRK1-208ENST00000532029 TSSK4Q6SA08 328 aa22.73■■□□□ 1.23
LRRK1-208ENST00000532029 LEKR1Q6ZMV7 388 aa22.73■■□□□ 1.23
LRRK1-208ENST00000532029 METTL3Q86U44 580 aaKnown RBP22.73■■□□□ 1.23
LRRK1-208ENST00000532029 TP53INP2Q8IXH6 220 aa22.73■■□□□ 1.23
LRRK1-208ENST00000532029 CASKIN2Q8WXE0 1202 aa22.73■■□□□ 1.23
LRRK1-208ENST00000532029 MTG2Q9H4K7 406 aa22.73■■□□□ 1.23
LRRK1-208ENST00000532029 UBA2Q9UBT2 640 aaPredicted RBP22.73■■□□□ 1.23
LRRK1-208ENST00000532029 J3KR12 359 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 K7ERQ8 282 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 K7ESF4 209 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 SMAD6O43541 496 aaKnown RBP22.72■■□□□ 1.23
LRRK1-208ENST00000532029 KIF5CO60282 957 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 CST8O60676 142 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 MX2P20592 715 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 MSNP26038 577 aaKnown RBP22.72■■□□□ 1.23
LRRK1-208ENST00000532029 GBE1Q04446 702 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 IL10RBQ08334 325 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 CAMK2GQ13555 558 aaPredicted RBP22.72■■□□□ 1.23
LRRK1-208ENST00000532029 ANO7Q6IWH7 933 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 C22orf39Q6P5X5 142 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 LRRC49Q8IUZ0 686 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 MAML2Q8IZL2 1156 aaPredicted RBP22.72■■□□□ 1.23
LRRK1-208ENST00000532029 PGBD3Q8N328 593 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 PLD5Q8N7P1 536 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 HMGB4Q8WW32 186 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 CCDC114Q96M63 670 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 CEP44Q9C0F1 390 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 FBRSQ9HAH7 460 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 PRSS16Q9NQE7 514 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 FCF1Q9Y324 198 aaKnown RBP22.72■■□□□ 1.23
LRRK1-208ENST00000532029 HEY1Q9Y5J3 304 aa22.72■■□□□ 1.23
LRRK1-208ENST00000532029 BNIP3LO60238 219 aa22.71■■□□□ 1.23
LRRK1-208ENST00000532029 SIN3BO75182 1162 aa22.71■■□□□ 1.23
LRRK1-208ENST00000532029 PYGMP11217 842 aa22.71■■□□□ 1.23
LRRK1-208ENST00000532029 RECQLP46063 649 aaPredicted RBP22.71■■□□□ 1.23
LRRK1-208ENST00000532029 GALNT2Q10471 571 aa22.71■■□□□ 1.23
LRRK1-208ENST00000532029 CCDC181Q5TID7 509 aa22.71■■□□□ 1.23
LRRK1-208ENST00000532029 ARHGAP36Q6ZRI8 547 aa22.71■■□□□ 1.23
LRRK1-208ENST00000532029 OR2T3Q8NH03 318 aa22.71■■□□□ 1.23
LRRK1-208ENST00000532029 FRS2Q8WU20 508 aa22.71■■□□□ 1.23
LRRK1-208ENST00000532029 HEMGNQ9BXL5 484 aa22.71■■□□□ 1.23
LRRK1-208ENST00000532029 OSBPL8Q9BZF1 889 aa22.71■■□□□ 1.23
LRRK1-208ENST00000532029 PDFQ9HBH1 243 aa22.71■■□□□ 1.23
LRRK1-208ENST00000532029 FARP1Q9Y4F1 1045 aaPredicted RBP22.71■■□□□ 1.23
LRRK1-208ENST00000532029 ACTL7AQ9Y615 435 aa22.71■■□□□ 1.23
LRRK1-208ENST00000532029 CHD5Q8TDI0 1954 aa22.7■■□□□ 1.23
LRRK1-208ENST00000532029 USP27XA6NNY8 438 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 MAP3K6O95382 1288 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 CD160O95971 181 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 TGM2P21980 687 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 HOXA6P31267 233 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 PTPN7P35236 360 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 NRLP54845 237 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 ZNF211Q13398 564 aaPredicted RBP22.7■■□□□ 1.22
LRRK1-208ENST00000532029 INO80DQ53TQ3 878 aaPredicted RBP22.7■■□□□ 1.22
LRRK1-208ENST00000532029 ZNF569Q5MCW4 686 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 C9orf64Q5T6V5 341 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 HEATR6Q6AI08 1181 aaKnown RBP22.7■■□□□ 1.22
LRRK1-208ENST00000532029 Q6ZVU0 165 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 BZW1Q7L1Q6 419 aaKnown RBP22.7■■□□□ 1.22
LRRK1-208ENST00000532029 PCDH20Q8N6Y1 951 aaKnown RBP22.7■■□□□ 1.22
LRRK1-208ENST00000532029 NSMCE1Q8WV22 266 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 PTPRN2Q92932 1015 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 CD248Q9HCU0 757 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 DTLQ9NZJ0 730 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 EFR3BQ9Y2G0 817 aa22.7■■□□□ 1.22
LRRK1-208ENST00000532029 RNASEH1O60930 286 aaKnown RBP22.69■■□□□ 1.22
LRRK1-208ENST00000532029 TMCC1O94876 653 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms