RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 A0A087WYN8 130 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 ACTL6BO94805 426 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 TMCC1O94876 653 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 PPP1R3DO95685 299 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 ITGA2BP08514 1039 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 PDIA3P30101 505 aaKnown RBP3.54□□□□□ -1.84
ATM-217ENST00000531957 PNLIPRP1P54315 467 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 GAS1P54826 345 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 TBX4P57082 545 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 BTKQ06187 659 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 GALNT1Q10472 559 aaPredicted RBP3.54□□□□□ -1.84
ATM-217ENST00000531957 PDCLQ13371 301 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 ALKBH1Q13686 389 aaKnown RBP3.54□□□□□ -1.84
ATM-217ENST00000531957 SYTL3Q4VX76 610 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 C9orf50Q5SZB4 431 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 TTC22Q5TAA0 569 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 HEPHL1Q6MZM0 1159 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 RRAGAQ7L523 313 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 ARMC9Q7Z3E5 817 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 SCN4BQ8IWT1 228 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 MIGA1Q8NAN2 632 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 BICD2Q8TD16 824 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 SLC2A12Q8TD20 617 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 TMED6Q8WW62 240 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 NR4A3Q92570 626 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 RSC1A1Q92681 617 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 ARRDC3Q96B67 414 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 C3orf49Q96BT1 292 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 ELAC2Q9BQ52 826 aaKnown RBP3.54□□□□□ -1.84
ATM-217ENST00000531957 CHST12Q9NRB3 414 aa3.54□□□□□ -1.84
ATM-217ENST00000531957 CKAP5Q14008 2032 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 DDTLA6NHG4 134 aaPredicted RBP3.53□□□□□ -1.84
ATM-217ENST00000531957 EFCAB8A8MWE9 144 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 VWA5AO00534 786 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 SYN3O14994 580 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 CAMTA2O94983 1202 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 CLDN7O95471 211 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 GLUD1P00367 558 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 FCGR1AP12314 374 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 SERPINB3P29508 390 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 SERPINA4P29622 427 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 GLUD2P49448 558 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 OAZ1P54368 228 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 AP2B1P63010 937 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 DSC1Q08554 894 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 KIF5AQ12840 1032 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 TRAF3Q13114 568 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 PLCB4Q15147 1175 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 ZACNQ401N2 412 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 VWA5B1Q5TIE3 1220 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 C9orf57Q5W0N0 161 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 SULT6B1Q6IMI4 303 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 CCSAPQ6IQ19 270 aaPredicted RBP3.53□□□□□ -1.84
ATM-217ENST00000531957 KLHL17Q6TDP4 642 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 CREB3L2Q70SY1 520 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 RAB11FIP2Q7L804 512 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 RASGRP2Q7LDG7 609 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 C16orf82Q7Z2V1 217 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 CUZD1Q86UP6 607 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 TRIM74Q86UV6 250 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 TRIM73Q86UV7 250 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 SLC44A2Q8IWA5 706 aaPredicted RBP3.53□□□□□ -1.84
ATM-217ENST00000531957 CLIP4Q8N3C7 705 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 NEXN-AS1Q8NBZ9 246 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 OR14A16Q8NHC5 309 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 WFIKKN2Q8TEU8 576 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 FAR1Q8WVX9 515 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 DNASE2BQ8WZ79 361 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 NPAS1Q99742 590 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 LHPPQ9H008 270 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 PABPC3Q9H361 631 aaKnown RBP3.53□□□□□ -1.84
ATM-217ENST00000531957 PRDM8Q9NQV8 689 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 SLC22A11Q9NSA0 550 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 OCIAD1Q9NX40 245 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 UPB1Q9UBR1 384 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 KCND3Q9UK17 655 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 C19orf53Q9UNZ5 99 aaPredicted RBP3.53□□□□□ -1.84
ATM-217ENST00000531957 RAI2Q9Y5P3 530 aa3.53□□□□□ -1.84
ATM-217ENST00000531957 LINC01553A4QN01 128 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 PRSS47A8MTI9 375 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 SMTNL1A8MU46 457 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 HSPB6O14558 160 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 ZNF432O94892 652 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 DDAH2O95865 285 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 ZNF12P17014 697 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 PRKCHP24723 683 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 AVPR2P30518 371 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 NUDT6P53370 316 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 CDH12P55289 794 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 ERVFC1-1P60608 527 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 GRSF1Q12849 480 aaKnown RBP eCLIP3.52□□□□□ -1.85
ATM-217ENST00000531957 COASYQ13057 564 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 TBRG1Q3YBR2 411 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 TDRD12Q587J7 1177 aaKnown RBP3.52□□□□□ -1.85
ATM-217ENST00000531957 GFI1BQ5VTD9 330 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 ATG9BQ674R7 924 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 PALB2Q86YC2 1186 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 SLC35F5Q8WV83 523 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 CPT1BQ92523 772 aa3.52□□□□□ -1.85
ATM-217ENST00000531957 EID2BQ96D98 161 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms