RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 MATN3O15232 486 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 COL6A2P12110 1019 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 CD52P31358 61 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 BRCC3P46736 316 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 MXRA7P84157 204 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 NAA25Q14CX7 972 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 METTL21CQ5VZV1 264 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 BTBD8Q5XKL5 378 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 PKN3Q6P5Z2 889 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 POTEHQ6S545 545 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 MAVSQ7Z434 540 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 CNTN4Q8IWV2 1026 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 ARHGAP12Q8IWW6 846 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 OR10T2Q8NGX3 314 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 CMTM5Q96DZ9 223 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 TSNARE1Q96NA8 513 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 TBL1YQ9BQ87 522 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 MRM3Q9HC36 420 aaKnown RBP17.51■□□□□ 0.39
BRCA2-204ENST00000530893 PNPOQ9NVS9 261 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 DNAJB4Q9UDY4 337 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 TLK1Q9UKI8 766 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 PCNTO95613 3336 aa17.51■□□□□ 0.39
BRCA2-204ENST00000530893 PGK1P00558 417 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 NMBRP28336 390 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 THPOP40225 353 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 GEMP55040 296 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 ACTR3P61158 418 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 NRG1Q02297 640 aaPredicted RBP17.5■□□□□ 0.39
BRCA2-204ENST00000530893 THOC5Q13769 683 aaKnown RBP17.5■□□□□ 0.39
BRCA2-204ENST00000530893 FSCBQ5H9T9 825 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 ZC3HC1Q86WB0 502 aaKnown RBP17.5■□□□□ 0.39
BRCA2-204ENST00000530893 DNAJC9Q8WXX5 260 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 ATXN7L3BQ96GX2 97 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 APOL2Q9BQE5 337 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 GLOD4Q9HC38 313 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 ENTPD7Q9NQZ7 604 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 ZNF358Q9NW07 568 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.5■□□□□ 0.39
BRCA2-204ENST00000530893 DFFAO00273 331 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 INPPL1O15357 1258 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 NVLO15381 856 aaKnown RBP17.5■□□□□ 0.39
BRCA2-204ENST00000530893 MGEA5O60502 916 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 MAFKO60675 156 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 PAGE1O75459 146 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 KRT36O76013 467 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 HSPA4LO95757 839 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 TPH1P17752 444 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 PRDX6P30041 224 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 ARRB2P32121 409 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 CPOXP36551 454 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 COPAP53621 1224 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 SMAD1Q15797 465 aaKnown RBP17.5■□□□□ 0.39
BRCA2-204ENST00000530893 MUM1Q2TAK8 710 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 SNX30Q5VWJ9 437 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 LRRTM3Q86VH5 581 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 SPATA2LQ8IUW3 424 aaPredicted RBP17.5■□□□□ 0.39
BRCA2-204ENST00000530893 TNS4Q8IZW8 715 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 FBXO27Q8NI29 283 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 STON2Q8WXE9 905 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 AZIN2Q96A70 460 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 PGLYRP2Q96PD5 576 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 THTPAQ9BU02 230 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 SIK2Q9H0K1 926 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 CDH19Q9H159 772 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 OXSMQ9NWU1 459 aa17.5■□□□□ 0.39
BRCA2-204ENST00000530893 TNFRSF10BO14763 440 aa17.49■□□□□ 0.39
BRCA2-204ENST00000530893 SEPT4O43236 478 aa17.49■□□□□ 0.39
BRCA2-204ENST00000530893 SLC5A3P53794 718 aa17.49■□□□□ 0.39
BRCA2-204ENST00000530893 PAN2Q504Q3 1202 aaKnown RBP17.49■□□□□ 0.39
BRCA2-204ENST00000530893 CFAP157Q5JU67 520 aa17.49■□□□□ 0.39
BRCA2-204ENST00000530893 EPGNQ6UW88 154 aa17.49■□□□□ 0.39
BRCA2-204ENST00000530893 OTOP3Q7RTS5 596 aa17.49■□□□□ 0.39
BRCA2-204ENST00000530893 PPHLN1Q8NEY8 458 aaKnown RBP17.49■□□□□ 0.39
BRCA2-204ENST00000530893 SCAMP5Q8TAC9 235 aa17.49■□□□□ 0.39
BRCA2-204ENST00000530893 CAB39LQ9H9S4 337 aa17.49■□□□□ 0.39
BRCA2-204ENST00000530893 RRAGCQ9HB90 399 aa17.49■□□□□ 0.39
BRCA2-204ENST00000530893 GPAMQ9HCL2 828 aa17.49■□□□□ 0.39
BRCA2-204ENST00000530893 UBP1Q9NZI7 540 aa17.49■□□□□ 0.39
BRCA2-204ENST00000530893 ANGPTL2Q9UKU9 493 aa17.49■□□□□ 0.39
BRCA2-204ENST00000530893 SQORQ9Y6N5 450 aa17.49■□□□□ 0.39
BRCA2-204ENST00000530893 TBX10O75333 385 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 SLC12A1Q13621 1099 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 GRM3Q14832 879 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 AFMIDQ63HM1 303 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 ZYG11AQ6WRX3 759 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 ATG14Q6ZNE5 492 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 LRRC74BQ6ZQY2 392 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 LMNTD2Q8IXW0 634 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 PPFIBP2Q8ND30 876 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 ZNF333Q96JL9 665 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 FCRL2Q96LA5 508 aaPredicted RBP17.48■□□□□ 0.39
BRCA2-204ENST00000530893 ADAM2Q99965 735 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 SLC7A8Q9UHI5 535 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 SLC39A10Q9ULF5 831 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 WASH4PA8MWX3 477 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 ADAMTS4O75173 837 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 CABYRO75952 493 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 PAMP19021 973 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 IRF9Q00978 393 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 YWHAHQ04917 246 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms