RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 HIC2Q96JB3 615 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 PARK7Q99497 189 aaKnown RBP7.84□□□□□ -1.15
CSDE1-213ENST00000530784 ADGRE3Q9BY15 652 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 API5Q9BZZ5 524 aaKnown RBP7.84□□□□□ -1.15
CSDE1-213ENST00000530784 RGL1Q9NZL6 768 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 SEMA5BQ9P283 1151 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 ZNF112Q9UJU3 913 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 PCDHB2Q9Y5E7 798 aa7.84□□□□□ -1.15
CSDE1-213ENST00000530784 LRRFIP2Q9Y608 721 aaKnown RBP7.84□□□□□ -1.15
CSDE1-213ENST00000530784 PDE4DIPQ5VU43 2346 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 E5RJQ4 531 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 ZSCAN9O15535 394 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-213ENST00000530784 TOP3BO95985 862 aaKnown RBP7.83□□□□□ -1.16
CSDE1-213ENST00000530784 MYL1P05976 194 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 IDEP14735 1019 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 HOXD10P28358 340 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 PSMC4P43686 418 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 RAE1P78406 368 aaKnown RBP7.83□□□□□ -1.16
CSDE1-213ENST00000530784 SLC5A9Q2M3M2 681 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 Q4G0T1 1027 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 TMEM196Q5HYL7 178 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 SCYL3Q8IZE3 742 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 RAET1EQ8TD07 263 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.83□□□□□ -1.16
CSDE1-213ENST00000530784 SPRTNQ9H040 489 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-213ENST00000530784 TMEM8AQ9HCN3 771 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 PHTF1Q9UMS5 762 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 VPS4AQ9UN37 437 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 RFX7Q2KHR2 1363 aa7.83□□□□□ -1.16
CSDE1-213ENST00000530784 ZSWIM8A7E2V4 1837 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 GAKO14976 1311 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 PDS5AQ29RF7 1337 aaKnown RBP7.82□□□□□ -1.16
CSDE1-213ENST00000530784 FAM234BA2RU67 622 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 CXCL11O14625 94 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 ENTPD3O75355 529 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 EGR1P18146 543 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 ADORA1P30542 326 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 MMP13P45452 471 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 NEK3P51956 506 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 JAK3P52333 1124 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 AK2P54819 239 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 GHRHRQ02643 423 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 ATP1A4Q13733 1029 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 TRIP6Q15654 476 aaKnown RBP7.82□□□□□ -1.16
CSDE1-213ENST00000530784 FAM90A2PQ658T7 463 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 FASTKD5Q7L8L6 764 aaKnown RBP7.82□□□□□ -1.16
CSDE1-213ENST00000530784 KRT73Q86Y46 540 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 OR2C3Q8N628 320 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 PRSS3P2Q8NHM4 247 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 CCDC138Q96M89 665 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 MEIS3Q99687 375 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 IDI2Q9BXS1 227 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 EIF2AQ9BY44 585 aaKnown RBP7.82□□□□□ -1.16
CSDE1-213ENST00000530784 VPS16Q9H269 839 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 FNIP2Q9P278 1114 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 MAFFQ9ULX9 164 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 PA2G4Q9UQ80 394 aaKnown RBP7.82□□□□□ -1.16
CSDE1-213ENST00000530784 MYH13Q9UKX3 1938 aa7.82□□□□□ -1.16
CSDE1-213ENST00000530784 A0A1B0GUL7 405 aa7.81□□□□□ -1.16
CSDE1-213ENST00000530784 OR2W5A6NFC9 320 aa7.81□□□□□ -1.16
CSDE1-213ENST00000530784 BTDP43251 543 aa7.81□□□□□ -1.16
CSDE1-213ENST00000530784 WDR5P61964 334 aaKnown RBP7.81□□□□□ -1.16
CSDE1-213ENST00000530784 YPEL5P62699 121 aa7.81□□□□□ -1.16
CSDE1-213ENST00000530784 PRKCZQ05513 592 aa7.81□□□□□ -1.16
CSDE1-213ENST00000530784 HNRNPA0Q13151 305 aaKnown RBP7.81□□□□□ -1.16
CSDE1-213ENST00000530784 PICALMQ13492 652 aa7.81□□□□□ -1.16
CSDE1-213ENST00000530784 BFSP2Q13515 415 aa7.81□□□□□ -1.16
CSDE1-213ENST00000530784 MVPQ14764 893 aaKnown RBP7.81□□□□□ -1.16
CSDE1-213ENST00000530784 KPNB1Q14974 876 aaKnown RBP7.81□□□□□ -1.16
CSDE1-213ENST00000530784 PFKFB3Q16875 520 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-213ENST00000530784 IZUMO3Q5VZ72 239 aa7.81□□□□□ -1.16
CSDE1-213ENST00000530784 ZNF566Q969W8 418 aa7.81□□□□□ -1.16
CSDE1-213ENST00000530784 GRAMD1AQ96CP6 724 aa7.81□□□□□ -1.16
CSDE1-213ENST00000530784 TUBA8Q9NY65 449 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-213ENST00000530784 ZHX2Q9Y6X8 837 aa7.81□□□□□ -1.16
CSDE1-213ENST00000530784 MROH7-TTC4A0A0A0MT08 1334 aa7.8□□□□□ -1.16
CSDE1-213ENST00000530784 DOCK2Q92608 1830 aa7.8□□□□□ -1.16
CSDE1-213ENST00000530784 DDTLA6NHG4 134 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-213ENST00000530784 C16orf96A6NNT2 1141 aa7.8□□□□□ -1.16
CSDE1-213ENST00000530784 H0YGN5 161 aa7.8□□□□□ -1.16
CSDE1-213ENST00000530784 MOSPD3O75425 235 aa7.8□□□□□ -1.16
CSDE1-213ENST00000530784 CCL5P13501 91 aa7.8□□□□□ -1.16
CSDE1-213ENST00000530784 EEF1GP26641 437 aaKnown RBP7.8□□□□□ -1.16
CSDE1-213ENST00000530784 UBXN2AP68543 259 aa7.8□□□□□ -1.16
CSDE1-213ENST00000530784 MAPKAPK3Q16644 382 aa7.8□□□□□ -1.16
CSDE1-213ENST00000530784 LRCH2Q5VUJ6 765 aa7.8□□□□□ -1.16
CSDE1-213ENST00000530784 NOL8Q76FK4 1167 aaKnown RBP7.8□□□□□ -1.16
CSDE1-213ENST00000530784 NUAK2Q9H093 628 aa7.8□□□□□ -1.16
CSDE1-213ENST00000530784 DDX4Q9NQI0 724 aaKnown RBP7.8□□□□□ -1.16
CSDE1-213ENST00000530784 ABHD10Q9NUJ1 306 aa7.8□□□□□ -1.16
CSDE1-213ENST00000530784 SLC45A1Q9Y2W3 748 aa7.8□□□□□ -1.16
CSDE1-213ENST00000530784 CENPFP49454 3210 aa7.8□□□□□ -1.16
CSDE1-213ENST00000530784 MKI67P46013 3256 aaKnown RBP7.79□□□□□ -1.16
CSDE1-213ENST00000530784 GPR75-ASB3A0A0A6YYF3 556 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 ADAM10O14672 748 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 TNPO2O14787 897 aaKnown RBP7.79□□□□□ -1.16
CSDE1-213ENST00000530784 VIPP01282 170 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 HOXD9P28356 352 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-213ENST00000530784 RARSP54136 660 aaKnown RBP7.79□□□□□ -1.16
CSDE1-213ENST00000530784 TIMM10P62072 90 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms