RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 COL4A2P08572 1712 aa7.47□□□□□ -1.21
SVIP-204ENST00000530199 MYH7P12883 1935 aa7.46□□□□□ -1.21
SVIP-204ENST00000530199 MTCL1Q9Y4B5 1905 aaKnown RBP7.46□□□□□ -1.21
SVIP-204ENST00000530199 NBPF19A0A087WUL8 3843 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 A0A0U1RQF3 1178 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 ADAMTS3O15072 1205 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 DNAJB5O75953 348 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 POMCP01189 267 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 CR2P20023 1033 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 MARK3P27448 753 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 ABCG1P45844 678 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 HSPA7P48741 367 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 CRYBB1P53674 252 aaPredicted RBP7.46□□□□□ -1.22
SVIP-204ENST00000530199 RIPPLY3P57055 190 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 PSMC1P62191 440 aaKnown RBP7.46□□□□□ -1.22
SVIP-204ENST00000530199 SEMA3BQ13214 749 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 HNRNPDQ14103 355 aaKnown RBP7.46□□□□□ -1.22
SVIP-204ENST00000530199 PDCD2Q16342 344 aaPredicted RBP7.46□□□□□ -1.22
SVIP-204ENST00000530199 CDC37Q16543 378 aaPredicted RBP7.46□□□□□ -1.22
SVIP-204ENST00000530199 MPEG1Q2M385 716 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 GPATCH4Q5T3I0 446 aaKnown RBP7.46□□□□□ -1.22
SVIP-204ENST00000530199 ZNF648Q5T619 568 aaPredicted RBP7.46□□□□□ -1.22
SVIP-204ENST00000530199 DOK3Q7L591 496 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 ERC1Q8IUD2 1116 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 SYTL1Q8IYJ3 562 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 AOPEPQ8N6M6 819 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 SEPT1Q8WYJ6 367 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 MSANTD3Q96H12 275 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 TMEM41AQ96HV5 264 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 SNX22Q96L94 193 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 TMEM47Q9BQJ4 181 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 NELFAQ9H3P2 528 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 NRDE2Q9H7Z3 1164 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 SEC61A2Q9H9S3 476 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 SERHLQ9NQF3 203 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 PAXBP1Q9Y5B6 917 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 WDR81Q562E7 1941 aa7.46□□□□□ -1.22
SVIP-204ENST00000530199 PLXNB3Q9ULL4 1909 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 GSTTP1A0A1W2PQM5 241 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 CDC14BO60729 498 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 BCAR3O75815 825 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 RHOBTB1O94844 696 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 UNC5CO95185 931 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 FGAP02671 866 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 URODP06132 367 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 CCDC192P0DO97 292 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 CSRP3P50461 194 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 CREB5Q02930 508 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 RAB32Q13637 225 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 SLC35G1Q2M3R5 365 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 FKBP15Q5T1M5 1219 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 TCERG1LQ5VWI1 586 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 LMBRD2Q68DH5 695 aaPredicted RBP7.45□□□□□ -1.22
SVIP-204ENST00000530199 GPRIN1Q7Z2K8 1008 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 GRASPQ7Z6J2 395 aaPredicted RBP7.45□□□□□ -1.22
SVIP-204ENST00000530199 GPR65Q8IYL9 337 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 RNF168Q8IYW5 571 aaPredicted RBP7.45□□□□□ -1.22
SVIP-204ENST00000530199 ZFP28Q8NHY6 868 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 ELSPBP1Q96BH3 223 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 IQCDQ96DY2 449 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 TTLL2Q9BWV7 592 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.45□□□□□ -1.22
SVIP-204ENST00000530199 PLA2G2FQ9BZM2 168 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 GJB4Q9NTQ9 266 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 LUZP4Q9P127 313 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 GINS2Q9Y248 185 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 FBN2P35556 2912 aa7.45□□□□□ -1.22
SVIP-204ENST00000530199 NOTCH2Q04721 2471 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 ZNF785A8K8V0 405 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 B8ZZF3 427 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 NUAK1O60285 661 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 MT-ND5P03915 603 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 ANXA2P07355 339 aaKnown RBP7.44□□□□□ -1.22
SVIP-204ENST00000530199 HNRNPA1P09651 372 aaKnown RBP eCLIP7.44□□□□□ -1.22
SVIP-204ENST00000530199 PAX3P23760 479 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 HOXA9P31269 272 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 CHKAP35790 457 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 SLC11A1P49279 550 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 SLC11A2P49281 568 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 PPP2CBP62714 309 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 PPP2CAP67775 309 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 PLCB4Q15147 1175 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 ELF2Q15723 593 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 CCDC184Q52MB2 194 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 COLEC12Q5KU26 742 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 ATXN7L2Q5T6C5 722 aaPredicted RBP7.44□□□□□ -1.22
SVIP-204ENST00000530199 MTHFD1LQ6UB35 978 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 PCSK4Q6UW60 755 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 ARHGEF18Q6ZSZ5 1173 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 ITFG1Q8TB96 612 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 TFAP2CQ92754 450 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 SCAMP4Q969E2 229 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 MBOAT7Q96N66 472 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 LMF1Q96S06 567 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 HERC2P3Q9BVR0 1158 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 ZNF334Q9HCZ1 680 aaPredicted RBP7.44□□□□□ -1.22
SVIP-204ENST00000530199 TBC1D13Q9NVG8 400 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 C2orf42Q9NWW7 574 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 PLEKHM1Q9Y4G2 1056 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 CEP83Q9Y592 693 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms