RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 CLSTN3Q9BQT9 956 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 GATA5Q9BWX5 397 aaPredicted RBP4.99□□□□□ -1.61
C11orf88-204ENST00000529661 CLPBQ9H078 707 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 MOV10Q9HCE1 1003 aaKnown RBP4.99□□□□□ -1.61
C11orf88-204ENST00000529661 POT1Q9NUX5 634 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 IPO11Q9UI26 975 aaKnown RBP4.99□□□□□ -1.61
C11orf88-204ENST00000529661 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.99□□□□□ -1.61
C11orf88-204ENST00000529661 GOLGA6L10A0A0M3HER8 536 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 A0A1W2PPH5 198 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 MYMKA6NI61 221 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 NPIPB13A6NJU9 1138 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 NPIPB5A8MRT5 1133 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 NPIPB4C9JG80 1138 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 F8W810 466 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 USO1O60763 962 aaKnown RBP4.98□□□□□ -1.61
C11orf88-204ENST00000529661 RTN3O95197 1032 aaPredicted RBP4.98□□□□□ -1.61
C11orf88-204ENST00000529661 ENO1P06733 434 aaKnown RBP4.98□□□□□ -1.61
C11orf88-204ENST00000529661 LDHCP07864 332 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 LYL1P12980 280 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 AKR1A1P14550 325 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 GPD2P43304 727 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 RPS6KA3P51812 740 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 POLGP54098 1239 aaPredicted RBP4.98□□□□□ -1.61
C11orf88-204ENST00000529661 ADPRHP54922 357 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 RPP30P78346 268 aaKnown RBP4.98□□□□□ -1.61
C11orf88-204ENST00000529661 SHC2P98077 582 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 DMWDQ09019 674 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 MTFR2Q6P444 385 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 INO80CQ6PI98 192 aaPredicted RBP4.98□□□□□ -1.61
C11orf88-204ENST00000529661 NEK10Q6ZWH5 1172 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 H1FNTQ75WM6 255 aaPredicted RBP4.98□□□□□ -1.61
C11orf88-204ENST00000529661 R3HCC1LQ7Z5L2 792 aaKnown RBP4.98□□□□□ -1.61
C11orf88-204ENST00000529661 PIP4P1Q86T03 277 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 ARFGAP1Q8N6T3 406 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 ADAMTS15Q8TE58 950 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 WIPF2Q8TF74 440 aaPredicted RBP4.98□□□□□ -1.61
C11orf88-204ENST00000529661 ATP2A3Q93084 1043 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 ZFYVE19Q96K21 471 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 CD180Q99467 661 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 TRMOQ9BU70 441 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 ABHD14AQ9BUJ0 271 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 PPP1R14DQ9NXH3 145 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 FBXO2Q9UK22 296 aaPredicted RBP4.98□□□□□ -1.61
C11orf88-204ENST00000529661 SUFUQ9UMX1 484 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 NAALADL1Q9UQQ1 740 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 CNPY2Q9Y2B0 182 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 HS3ST3B1Q9Y662 390 aa4.98□□□□□ -1.61
C11orf88-204ENST00000529661 TDRD9Q8NDG6 1382 aaKnown RBP4.98□□□□□ -1.61
C11orf88-204ENST00000529661 EMSYQ7Z589 1322 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 H3BNX3 289 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 SGPL1O95470 568 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 F9P00740 461 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 ALDOCP09972 364 aaKnown RBP4.97□□□□□ -1.61
C11orf88-204ENST00000529661 SCP2P22307 547 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 PRKCHP24723 683 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 DCAF7P61962 342 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 ARHGAP8P85298 464 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 PTP4A2Q12974 167 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 SEMA3AQ14563 771 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 RUNDC3AQ59EK9 446 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 CCDC30Q5VVM6 783 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 TMEM200AQ86VY9 491 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 SCN4BQ8IWT1 228 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 BCAS4Q8TDM0 211 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 KCNJ9Q92806 393 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 NAF1Q96HR8 494 aaKnown RBP4.97□□□□□ -1.61
C11orf88-204ENST00000529661 TUBB6Q9BUF5 446 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 HDHD5Q9BXW7 423 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 TRIM31Q9BZY9 425 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 CTDSP1Q9GZU7 261 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 PLEKHA5Q9HAU0 1116 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 PAPOLBQ9NRJ5 636 aaKnown RBP4.97□□□□□ -1.61
C11orf88-204ENST00000529661 BEX4Q9NWD9 120 aaPredicted RBP4.97□□□□□ -1.61
C11orf88-204ENST00000529661 SQORQ9Y6N5 450 aa4.97□□□□□ -1.61
C11orf88-204ENST00000529661 PGPEP1LA6NFU8 196 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 GAGE10A6NGK3 116 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 PRSS47A8MTI9 375 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 TEX22C9J3V5 150 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 CNTN5O94779 1100 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 CENPBP07199 599 aaPredicted RBP4.96□□□□□ -1.62
C11orf88-204ENST00000529661 PSG1P11464 419 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 PKMP14618 531 aaKnown RBP4.96□□□□□ -1.62
C11orf88-204ENST00000529661 HNF1BP35680 557 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 PAFAH1B1P43034 410 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 B4GALNT1Q00973 533 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 SRSF1Q07955 248 aaKnown RBP eCLIP4.96□□□□□ -1.62
C11orf88-204ENST00000529661 TSTQ16762 297 aaKnown RBP4.96□□□□□ -1.62
C11orf88-204ENST00000529661 ZNF766Q5HY98 468 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 SH2D4BQ5SQS7 431 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 HAUS3Q68CZ6 603 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 COLCA1Q6ZS62 124 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 ARL14EPQ8N8R7 260 aaPredicted RBP4.96□□□□□ -1.62
C11orf88-204ENST00000529661 ELP4Q96EB1 424 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 CHCHD6Q9BRQ6 235 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 USP44Q9H0E7 712 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 INTS2Q9H0H0 1204 aaKnown RBP4.96□□□□□ -1.62
C11orf88-204ENST00000529661 ERVK-5Q9HDB9 667 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 TXNRD2Q9NNW7 524 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 SEMA4BQ9NPR2 832 aaPredicted RBP4.96□□□□□ -1.62
C11orf88-204ENST00000529661 HCN3Q9P1Z3 774 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms