RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 ZSCAN30Q86W11 494 aa11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 PTRH1Q86Y79 214 aaKnown RBP11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 LMX1AQ8TE12 382 aa11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 SLC39A13Q96H72 371 aa11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 TMEM74Q96NL1 305 aa11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 SERPINB11Q96P15 392 aa11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 LENG8Q96PV6 779 aaPredicted RBP11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 NUCKS1Q9H1E3 243 aaKnown RBP11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 KCTD10Q9H3F6 313 aa11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 CAAP1Q9H8G2 361 aa11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 FZD3Q9NPG1 666 aa11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 SPASTQ9UBP0 616 aa11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 TSPAN16Q9UKR8 245 aa11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 PADI4Q9UM07 663 aa11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 ZFR2Q9UPR6 939 aaKnown RBP11.94□□□□□ -0.5
AMBRA1-207ENST00000529553 LMO7DNF2Z398 122 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 PCDH8O95206 1070 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 LTFP02788 710 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 NR3C1P04150 777 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 JMJD7P0C870 316 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 PDCP20941 246 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 GTF2H1P32780 548 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 RPS21P63220 83 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 PPP3CAQ08209 521 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 KCNAB2Q13303 367 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 INTS8Q75QN2 995 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 PTAR1Q7Z6K3 402 aaPredicted RBP11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 SLC35F3Q8IY50 421 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 LGI2Q8N0V4 545 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 HTR3CQ8WXA8 447 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 RNF34Q969K3 372 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 DHX58Q96C10 678 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 FEM1CQ96JP0 617 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 GFM1Q96RP9 751 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 HDAC8Q9BY41 377 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 SLC17A9Q9BYT1 436 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 EPB41L5Q9HCM4 733 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 TMEM8AQ9HCN3 771 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 DYRK4Q9NR20 520 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 KLF15Q9UIH9 416 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 SLC25A13Q9UJS0 675 aa11.93□□□□□ -0.5
AMBRA1-207ENST00000529553 COL27A1Q8IZC6 1860 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 POM121BA6NF01 834 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 VDRP11473 427 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 LCP1P13796 627 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 PDGFRAP16234 1089 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 TACR2P21452 398 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 CD97P48960 835 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 CYP4F2P78329 520 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 TTC39BQ5VTQ0 682 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 CEP135Q66GS9 1140 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 KRT39Q6A163 491 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 OR6B2Q6IFH4 312 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 KIAA1161Q6NSJ0 714 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 ERN2Q76MJ5 926 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 BEND5Q7L4P6 421 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 OR6C4Q8NGE1 309 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 SPATA20Q8TB22 786 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 SLC35F5Q8WV83 523 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 ALG14Q96F25 216 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 BTN2A3PQ96KV6 586 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 CCDC114Q96M63 670 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 EPAS1Q99814 870 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 SLC12A9Q9BXP2 914 aa11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 PLEKHB1Q9UF11 243 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-207ENST00000529553 VPS37CA5D8V6 355 aaPredicted RBP11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 D6RAR5 112 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 KPNA3O00505 521 aaPredicted RBP11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 FPGTO14772 594 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 CALUO43852 315 aaPredicted RBP11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 FBXO21O94952 628 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 PAK4O96013 591 aaPredicted RBP11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 APOEP02649 317 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 PRNPP04156 253 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 ANXA6P08133 673 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 KRT13P13646 458 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 PDIA4P13667 645 aaKnown RBP11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 WT1P19544 449 aaPredicted RBP11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 CHRNA3P32297 505 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 NOS2P35228 1153 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 NASPP49321 788 aaPredicted RBP11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 ADKP55263 362 aaKnown RBP11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 POLE2P56282 527 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 STK4Q13043 487 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 PDE1CQ14123 709 aaPredicted RBP11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 PTK2BQ14289 1009 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 DRAP1Q14919 205 aaPredicted RBP11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 NFIL3Q16649 462 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 SEL1L3Q68CR1 1132 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 LVRNQ6Q4G3 990 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 LCLAT1Q6UWP7 414 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 Q6ZVU0 165 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 B3GNT8Q7Z7M8 397 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 VASH2Q86V25 355 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 CCAR2Q8N163 923 aaKnown RBP11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 SDR16C5Q8N3Y7 309 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 SH2D3CQ8N5H7 860 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 UBA3Q8TBC4 463 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 DQX1Q8TE96 717 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms