RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 RASGRP4Q8TDF6 673 aa8.13□□□□□ -1.11
C11orf88-203ENST00000529167 PXYLP1Q8TE99 480 aa8.13□□□□□ -1.11
C11orf88-203ENST00000529167 RAB2BQ8WUD1 216 aa8.13□□□□□ -1.11
C11orf88-203ENST00000529167 REXO5Q96IC2 774 aaKnown RBP8.13□□□□□ -1.11
C11orf88-203ENST00000529167 FAM111AQ96PZ2 611 aa8.13□□□□□ -1.11
C11orf88-203ENST00000529167 GON7Q9BXV9 100 aa8.13□□□□□ -1.11
C11orf88-203ENST00000529167 ZNF717Q9BY31 904 aaPredicted RBP8.13□□□□□ -1.11
C11orf88-203ENST00000529167 ACSS3Q9H6R3 686 aa8.13□□□□□ -1.11
C11orf88-203ENST00000529167 C8orf4Q9NR00 106 aa8.13□□□□□ -1.11
C11orf88-203ENST00000529167 DUS2Q9NX74 493 aaKnown RBP8.13□□□□□ -1.11
C11orf88-203ENST00000529167 PFDN2Q9UHV9 154 aa8.13□□□□□ -1.11
C11orf88-203ENST00000529167 MINPP1Q9UNW1 487 aa8.13□□□□□ -1.11
C11orf88-203ENST00000529167 POLHQ9Y253 713 aa8.13□□□□□ -1.11
C11orf88-203ENST00000529167 DENND3A2RUS2 1198 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 ERVH48-1M5A8F1 160 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 ENTPD3O75355 529 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 ALDH1A2O94788 518 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 TNFAIP3P21580 790 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 MYF6P23409 242 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 PHKA1P46020 1223 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 MRPS22P82650 360 aaKnown RBP8.12□□□□□ -1.11
C11orf88-203ENST00000529167 TARDBPQ13148 414 aaKnown RBP eCLIP8.12□□□□□ -1.11
C11orf88-203ENST00000529167 DNASE1L3Q13609 305 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 FASTKD3Q14CZ7 662 aaKnown RBP8.12□□□□□ -1.11
C11orf88-203ENST00000529167 FAM26FQ5R3K3 315 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 PERM1Q5SV97 790 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 SHEQ5VZ18 495 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 IQSEC1Q6DN90 963 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 CORO6Q6QEF8 472 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 FRMD7Q6ZUT3 714 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 C15orf52Q6ZUT6 534 aaKnown RBP8.12□□□□□ -1.11
C11orf88-203ENST00000529167 GPBP1Q86WP2 473 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 CRLF3Q8IUI8 442 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 AFAP1L2Q8N4X5 818 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 TTC17Q96AE7 1141 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 E2F7Q96AV8 911 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 ZNF594Q96JF6 807 aaPredicted RBP8.12□□□□□ -1.11
C11orf88-203ENST00000529167 NELL2Q99435 816 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 SERPINI1Q99574 410 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 EBF4Q9BQW3 602 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 COQ10BQ9H8M1 238 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 EHMT1Q9H9B1 1298 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 NPAP1Q9NZP6 1156 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 TXNDC16Q9P2K2 825 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 NUP50Q9UKX7 468 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 RNF112Q9ULX5 631 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 HTRA2O43464 458 aaPredicted RBP8.12□□□□□ -1.11
C11orf88-203ENST00000529167 KPNA6O60684 536 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 SEC14L2O76054 403 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 OLFM2O95897 454 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 XRCC5P13010 732 aaKnown RBP8.12□□□□□ -1.11
C11orf88-203ENST00000529167 MAP4P27816 1152 aaKnown RBP8.12□□□□□ -1.11
C11orf88-203ENST00000529167 CASP3P42574 277 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 OR3A3P47888 321 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 OTUD4Q01804 1114 aaKnown RBP8.12□□□□□ -1.11
C11orf88-203ENST00000529167 RAD51Q06609 339 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 MESDQ14696 234 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 SNX17Q15036 470 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 TMEM119Q4V9L6 283 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 IFIT1BQ5T764 474 aaKnown RBP8.12□□□□□ -1.11
C11orf88-203ENST00000529167 NECAB2Q7Z6G3 386 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 TPH2Q8IWU9 490 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 FAM109AQ8N4B1 249 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 CERS5Q8N5B7 392 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 SNX31Q8N9S9 440 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 SLC22A8Q8TCC7 542 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 PNPT1Q8TCS8 783 aaKnown RBP8.12□□□□□ -1.11
C11orf88-203ENST00000529167 ATG4AQ8WYN0 398 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 RILPQ96NA2 401 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 PAFAH2Q99487 392 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 TARS2Q9BW92 718 aaKnown RBP8.12□□□□□ -1.11
C11orf88-203ENST00000529167 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.12□□□□□ -1.11
C11orf88-203ENST00000529167 VPS37BQ9H9H4 285 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 XPNPEP1Q9NQW7 623 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 DPP7Q9UHL4 492 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 SLC27A5Q9Y2P5 690 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 TCAF1Q9Y4C2 921 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 A0A0C4DFX4 3053 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 ROBO3Q96MS0 1386 aa8.12□□□□□ -1.11
C11orf88-203ENST00000529167 ISPDA4D126 451 aa8.11□□□□□ -1.11
C11orf88-203ENST00000529167 ATP5J2-PTCD1G3V325 749 aa8.11□□□□□ -1.11
C11orf88-203ENST00000529167 LINC01387J3KSC0 135 aa8.11□□□□□ -1.11
C11orf88-203ENST00000529167 PLOD2O00469 737 aa8.11□□□□□ -1.11
C11orf88-203ENST00000529167 NOL3O60936 208 aaKnown RBP8.11□□□□□ -1.11
C11orf88-203ENST00000529167 BCAS2O75934 225 aaPredicted RBP8.11□□□□□ -1.11
C11orf88-203ENST00000529167 MAP3K6O95382 1288 aa8.11□□□□□ -1.11
C11orf88-203ENST00000529167 FGRP09769 529 aa8.11□□□□□ -1.11
C11orf88-203ENST00000529167 PTPN1P18031 435 aaKnown RBP8.11□□□□□ -1.11
C11orf88-203ENST00000529167 SERPINB1P30740 379 aa8.11□□□□□ -1.11
C11orf88-203ENST00000529167 ARL1P40616 181 aaPredicted RBP8.11□□□□□ -1.11
C11orf88-203ENST00000529167 TECP42680 631 aa8.11□□□□□ -1.11
C11orf88-203ENST00000529167 HCAR3P49019 387 aa8.11□□□□□ -1.11
C11orf88-203ENST00000529167 FXR2P51116 673 aaKnown RBP eCLIP8.11□□□□□ -1.11
C11orf88-203ENST00000529167 MYL6P60660 151 aa8.11□□□□□ -1.11
C11orf88-203ENST00000529167 SRP54P61011 504 aaKnown RBP8.11□□□□□ -1.11
C11orf88-203ENST00000529167 PPIL2Q13356 520 aa8.11□□□□□ -1.11
C11orf88-203ENST00000529167 TNFAIP1Q13829 316 aa8.11□□□□□ -1.11
C11orf88-203ENST00000529167 PPP2R5DQ14738 602 aa8.11□□□□□ -1.11
C11orf88-203ENST00000529167 MORF4L2Q15014 288 aa8.11□□□□□ -1.11
C11orf88-203ENST00000529167 AASDHQ4L235 1098 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms