RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 GSTT2P0CG29 244 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 GSTT2BP0CG30 244 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 MAP4P27816 1152 aaKnown RBP18.18■□□□□ 0.5
LTBP3-210ENST00000528516 KLF10Q13118 480 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 FUT11Q495W5 492 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 FBXO47Q5MNV8 452 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 ZFP1Q6P2D0 407 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 GRIN3AQ8TCU5 1115 aa18.18■□□□□ 0.5
LTBP3-210ENST00000528516 C18orf25Q96B23 403 aaPredicted RBP18.18■□□□□ 0.5
LTBP3-210ENST00000528516 WDR83Q9BRX9 315 aaKnown RBP18.18■□□□□ 0.5
LTBP3-210ENST00000528516 LSM8O95777 96 aaKnown RBP18.17■□□□□ 0.5
LTBP3-210ENST00000528516 PSMB4P28070 264 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 NOTUMQ6P988 496 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 CYP2R1Q6VVX0 501 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 Q6ZNX1 250 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 CDCA5Q96FF9 252 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 FUOMA2VDF0 154 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 H3BNX3 289 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 AP1G1O43747 822 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 ERBB2P04626 1255 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 NAGLUP54802 743 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 NR1D2Q14995 579 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 PPP1R26Q5T8A7 1209 aaPredicted RBP18.17■□□□□ 0.5
LTBP3-210ENST00000528516 FAM47BQ8NA70 645 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 KLHL25Q9H0H3 589 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 RBM38Q9H0Z9 239 aaKnown RBP18.17■□□□□ 0.5
LTBP3-210ENST00000528516 CAB39LQ9H9S4 337 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 ZNF536O15090 1300 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 DLEC1Q9Y238 1755 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 K7EPI3 171 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 RECQL4O94761 1208 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 SERPINE1P05121 402 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 PAMP19021 973 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 PTPN7P35236 360 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 KPNA1P52294 538 aaPredicted RBP18.17■□□□□ 0.5
LTBP3-210ENST00000528516 TAF1CQ15572 869 aaPredicted RBP18.17■□□□□ 0.5
LTBP3-210ENST00000528516 ADGRF2Q8IZF7 708 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 SLC35B2Q8TB61 432 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 VCPIP1Q96JH7 1222 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 SLC4A5Q9BY07 1137 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 ZNF518BQ9C0D4 1074 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 HMGXB4Q9UGU5 601 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 SUN2Q9UH99 717 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 MID2Q9UJV3 735 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 ITGB1BP2Q9UKP3 347 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 BAG5Q9UL15 447 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 GSTA4O15217 222 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 BIRC5O15392 142 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 H6PDO95479 791 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 PAX3P23760 479 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 BTG3Q14201 252 aaPredicted RBP18.17■□□□□ 0.5
LTBP3-210ENST00000528516 C10orf107Q8IVU9 208 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 CENPSQ8N2Z9 138 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 RCN3Q96D15 328 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 TRPC7Q9HCX4 862 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 STK39Q9UEW8 545 aa18.17■□□□□ 0.5
LTBP3-210ENST00000528516 ATP6AP2A0A1C7CYW4 349 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 ATP6AP2O75787 350 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 C4BPAP04003 597 aaKnown RBP18.16■□□□□ 0.5
LTBP3-210ENST00000528516 USP17L7P0C7H9 530 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 CSH1P0DML2 217 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 CSH2P0DML3 217 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 ZNF23P17027 643 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 SERPINB9P50453 376 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 TRAF2Q12933 501 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 LAMC2Q13753 1193 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 ZPBP2Q6X784 338 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 ARCQ7LC44 396 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 UNC5BQ8IZJ1 945 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 HTR3CQ8WXA8 447 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 EIF2AQ9BY44 585 aaKnown RBP18.16■□□□□ 0.5
LTBP3-210ENST00000528516 LRFN2Q9ULH4 789 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 ARAP2Q8WZ64 1704 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 STX16-NPEPL1H3BU86 382 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 ME2P23368 584 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 OR1G1P47890 313 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 BCAP31P51572 246 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 ZNF235Q14590 738 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 PPM1LQ5SGD2 360 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 CES4AQ5XG92 561 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 SDCCAG3Q96C92 435 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 SEPT5Q99719 369 aaPredicted RBP18.16■□□□□ 0.5
LTBP3-210ENST00000528516 ACO2Q99798 780 aaKnown RBP18.16■□□□□ 0.5
LTBP3-210ENST00000528516 EGFL8Q99944 293 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 PRDM12Q9H4Q4 367 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 FADS3Q9Y5Q0 445 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 SP2Q02086 613 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 DGKDQ16760 1214 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 PPM1JQ5JR12 505 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 TRMT10BQ6PF06 316 aaKnown RBP18.16■□□□□ 0.5
LTBP3-210ENST00000528516 ABHD15Q6UXT9 468 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 NIPA1Q7RTP0 329 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 THEM5Q8N1Q8 247 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 PYROXD2Q8N2H3 581 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 C12orf43Q96C57 262 aaKnown RBP18.16■□□□□ 0.5
LTBP3-210ENST00000528516 SPATA17Q96L03 361 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 CIB1Q99828 191 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 ILKAPQ9H0C8 392 aaPredicted RBP18.16■□□□□ 0.5
LTBP3-210ENST00000528516 COQ10BQ9H8M1 238 aa18.16■□□□□ 0.5
LTBP3-210ENST00000528516 NDFIP2Q9NV92 336 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms