RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 DAB1O75553 588 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 C1QL1O75973 258 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 ERBB2P04626 1255 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 CHRNA3P32297 505 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 E2F1Q01094 437 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 KCNMA1Q12791 1236 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 ZNF284Q2VY69 593 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 OR6B2Q6IFH4 312 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 NEK5Q6P3R8 708 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 C1orf131Q8NDD1 294 aaKnown RBP24.16■■□□□ 1.46
CPSF1-202ENST00000527827 OR2A12Q8NGT7 310 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 OR4C6Q8NH72 309 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 SHC3Q92529 594 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 FCRL3Q96P31 734 aaPredicted RBP24.16■■□□□ 1.46
CPSF1-202ENST00000527827 SIK2Q9H0K1 926 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 MUC3BQ9H195 1237 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 FZD3Q9NPG1 666 aa24.16■■□□□ 1.46
CPSF1-202ENST00000527827 I6L893 689 aaPredicted RBP24.15■■□□□ 1.46
CPSF1-202ENST00000527827 M0QYT0 321 aa24.15■■□□□ 1.46
CPSF1-202ENST00000527827 MT-CO3P00414 261 aa24.15■■□□□ 1.46
CPSF1-202ENST00000527827 GIMD1P0DJR0 217 aa24.15■■□□□ 1.46
CPSF1-202ENST00000527827 C19orf57Q0VDD7 668 aa24.15■■□□□ 1.46
CPSF1-202ENST00000527827 ALFQ53S48 1182 aa24.15■■□□□ 1.46
CPSF1-202ENST00000527827 KDM7AQ6ZMT4 941 aa24.15■■□□□ 1.46
CPSF1-202ENST00000527827 HORMAD1Q86X24 394 aa24.15■■□□□ 1.46
CPSF1-202ENST00000527827 ERICH1Q86X53 443 aa24.15■■□□□ 1.46
CPSF1-202ENST00000527827 ZNF683Q8IZ20 524 aa24.15■■□□□ 1.46
CPSF1-202ENST00000527827 TMIEQ8NEW7 156 aa24.15■■□□□ 1.46
CPSF1-202ENST00000527827 FAM81BQ96LP2 452 aa24.15■■□□□ 1.46
CPSF1-202ENST00000527827 PIGVQ9NUD9 493 aa24.15■■□□□ 1.46
CPSF1-202ENST00000527827 VPS51Q9UID3 782 aa24.15■■□□□ 1.46
CPSF1-202ENST00000527827 KPNA3O00505 521 aaPredicted RBP24.14■■□□□ 1.45
CPSF1-202ENST00000527827 SMAD6O43541 496 aaKnown RBP24.14■■□□□ 1.45
CPSF1-202ENST00000527827 ADCY5O95622 1261 aa24.14■■□□□ 1.45
CPSF1-202ENST00000527827 NOS2P35228 1153 aa24.14■■□□□ 1.45
CPSF1-202ENST00000527827 KRT83P78385 493 aa24.14■■□□□ 1.45
CPSF1-202ENST00000527827 DAB2P98082 770 aa24.14■■□□□ 1.45
CPSF1-202ENST00000527827 SLC6A3Q01959 620 aa24.14■■□□□ 1.45
CPSF1-202ENST00000527827 TBC1D25Q3MII6 688 aa24.14■■□□□ 1.45
CPSF1-202ENST00000527827 PTPN20Q4JDL3 420 aa24.14■■□□□ 1.45
CPSF1-202ENST00000527827 SLC26A9Q7LBE3 791 aa24.14■■□□□ 1.45
CPSF1-202ENST00000527827 ATP11CQ8NB49 1132 aa24.14■■□□□ 1.45
CPSF1-202ENST00000527827 OR13H1Q8NG92 308 aa24.14■■□□□ 1.45
CPSF1-202ENST00000527827 NOX5Q96PH1 765 aa24.14■■□□□ 1.45
CPSF1-202ENST00000527827 TRPM6Q9BX84 2022 aa24.14■■□□□ 1.45
CPSF1-202ENST00000527827 ARHGEF38Q9NXL2 777 aa24.14■■□□□ 1.45
CPSF1-202ENST00000527827 APEX2Q9UBZ4 518 aa24.14■■□□□ 1.45
CPSF1-202ENST00000527827 ZFR2Q9UPR6 939 aaKnown RBP24.14■■□□□ 1.45
CPSF1-202ENST00000527827 FARP1Q9Y4F1 1045 aaPredicted RBP24.14■■□□□ 1.45
CPSF1-202ENST00000527827 DOCK4Q8N1I0 1966 aa24.13■■□□□ 1.45
CPSF1-202ENST00000527827 FFAR2O15552 330 aa24.13■■□□□ 1.45
CPSF1-202ENST00000527827 RHOCP08134 193 aa24.13■■□□□ 1.45
CPSF1-202ENST00000527827 TFE3P19532 575 aaPredicted RBP24.13■■□□□ 1.45
CPSF1-202ENST00000527827 RRM1P23921 792 aa24.13■■□□□ 1.45
CPSF1-202ENST00000527827 ACTN2P35609 894 aa24.13■■□□□ 1.45
CPSF1-202ENST00000527827 GCNT7Q6ZNI0 430 aa24.13■■□□□ 1.45
CPSF1-202ENST00000527827 CHST14Q8NCH0 376 aa24.13■■□□□ 1.45
CPSF1-202ENST00000527827 ZNF397Q8NF99 534 aaPredicted RBP24.13■■□□□ 1.45
CPSF1-202ENST00000527827 NPY6RQ99463 290 aa24.13■■□□□ 1.45
CPSF1-202ENST00000527827 C2orf49Q9BVC5 232 aaPredicted RBP24.13■■□□□ 1.45
CPSF1-202ENST00000527827 TKTL2Q9H0I9 626 aa24.13■■□□□ 1.45
CPSF1-202ENST00000527827 AJAP1Q9UKB5 411 aaPredicted RBP24.13■■□□□ 1.45
CPSF1-202ENST00000527827 PCDHB1Q9Y5F3 818 aa24.13■■□□□ 1.45
CPSF1-202ENST00000527827 SNX10Q9Y5X0 201 aa24.13■■□□□ 1.45
CPSF1-202ENST00000527827 PIAS2O75928 621 aa24.12■■□□□ 1.45
CPSF1-202ENST00000527827 ZIC2O95409 532 aaPredicted RBP24.12■■□□□ 1.45
CPSF1-202ENST00000527827 FGFR1OPO95684 399 aaKnown RBP24.12■■□□□ 1.45
CPSF1-202ENST00000527827 HNRNPA2B1P22626 353 aaKnown RBP24.12■■□□□ 1.45
CPSF1-202ENST00000527827 AKT2P31751 481 aa24.12■■□□□ 1.45
CPSF1-202ENST00000527827 CXCR3P49682 368 aa24.12■■□□□ 1.45
CPSF1-202ENST00000527827 CLDN2P57739 230 aa24.12■■□□□ 1.45
CPSF1-202ENST00000527827 TLE3Q04726 772 aa24.12■■□□□ 1.45
CPSF1-202ENST00000527827 CCDC173Q0VFZ6 552 aa24.12■■□□□ 1.45
CPSF1-202ENST00000527827 CDCP2Q5VXM1 449 aa24.12■■□□□ 1.45
CPSF1-202ENST00000527827 GBP6Q6ZN66 633 aa24.12■■□□□ 1.45
CPSF1-202ENST00000527827 TMC6Q7Z403 805 aa24.12■■□□□ 1.45
CPSF1-202ENST00000527827 SLC22A18ASQ8N1D0 253 aa24.12■■□□□ 1.45
CPSF1-202ENST00000527827 CCDC114Q96M63 670 aa24.12■■□□□ 1.45
CPSF1-202ENST00000527827 CALN1Q9BXU9 219 aa24.12■■□□□ 1.45
CPSF1-202ENST00000527827 MGAQ8IWI9 3026 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 SETXQ7Z333 2677 aaKnown RBP24.11■■□□□ 1.45
CPSF1-202ENST00000527827 A0A0D9SEW6 157 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 DRGXA6NNA5 263 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 PRNPP04156 253 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 CKMT1AP12532 417 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 PTK2Q05397 1052 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 CCDC15Q0P6D6 951 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 HS1BP3Q53T59 392 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 ARSIQ5FYB1 569 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 BRMS1LQ5PSV4 323 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 ARTNQ5T4W7 220 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 SEL1L3Q68CR1 1132 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 LINGO4Q6UY18 593 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 ERN2Q76MJ5 926 aaKnown RBP24.11■■□□□ 1.45
CPSF1-202ENST00000527827 GPR155Q7Z3F1 870 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 ABI3BPQ7Z7G0 1075 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 SETD3Q86TU7 594 aaPredicted RBP24.11■■□□□ 1.45
CPSF1-202ENST00000527827 SPACA3Q8IXA5 215 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 DCAF4L2Q8NA75 395 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 LSM14AQ8ND56 463 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms