RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 METTL3Q86U44 580 aaKnown RBP16.86■□□□□ 0.29
CAPN1-205ENST00000526954 CREG2Q8IUH2 290 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 CCDC33Q8N5R6 958 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 USP33Q8TEY7 942 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 CYB5D2Q8WUJ1 264 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 CASKIN2Q8WXE0 1202 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 HAUS1Q96CS2 278 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 MYO19Q96H55 970 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 ZNF599Q96NL3 588 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 FOXQ1Q9C009 403 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 SP110Q9HB58 689 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 SLC25A13Q9UJS0 675 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 R3HDM2Q9Y2K5 976 aaKnown RBP16.86■□□□□ 0.29
CAPN1-205ENST00000526954 ATP9BO43861 1147 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 PEX11BO96011 259 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 MT-CO1P00395 513 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 NUMBP49757 651 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 SERPINH1P50454 418 aaKnown RBP16.85■□□□□ 0.29
CAPN1-205ENST00000526954 CLCN6P51797 869 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 ZNF234Q14588 700 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 RFTN1Q14699 578 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-205ENST00000526954 UBXN2BQ14CS0 331 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 PRKD1Q15139 912 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-205ENST00000526954 EGFLAMQ63HQ2 1017 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 ADAT2Q7Z6V5 191 aaKnown RBP16.85■□□□□ 0.29
CAPN1-205ENST00000526954 CCDC13Q8IYE1 715 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 SH2D3CQ8N5H7 860 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 ZNF513Q8N8E2 541 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-205ENST00000526954 PJA1Q8NG27 643 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 KIF18AQ8NI77 898 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 SLC35B2Q8TB61 432 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 TFB1MQ8WVM0 346 aaKnown RBP16.85■□□□□ 0.29
CAPN1-205ENST00000526954 CLDN23Q96B33 292 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 RPL10LQ96L21 214 aaKnown RBP16.85■□□□□ 0.29
CAPN1-205ENST00000526954 LGMNQ99538 433 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 TMEM245Q9H330 911 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 LMAN1LQ9HAT1 526 aa16.85■□□□□ 0.29
CAPN1-205ENST00000526954 UBA2Q9UBT2 640 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-205ENST00000526954 TTC28Q96AY4 2481 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 ANTXRLA6NF34 631 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 TMEM221A6NGB7 291 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 M0R296 226 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 MCF2LO15068 1137 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 MATN3O15232 486 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 ZNF189O75820 626 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-205ENST00000526954 SRCP12931 536 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 TIE1P35590 1138 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 NNMTP40261 264 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 STK19P49842 368 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-205ENST00000526954 SEC13P55735 322 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 EIF3EP60228 445 aaKnown RBP16.84■□□□□ 0.29
CAPN1-205ENST00000526954 ST8SIA6P61647 398 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 HNRNPDQ14103 355 aaKnown RBP16.84■□□□□ 0.29
CAPN1-205ENST00000526954 CCNG2Q16589 344 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 SLC45A4Q5BKX6 768 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 TMCO4Q5TGY1 634 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 DRICH1Q6PGQ1 229 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-205ENST00000526954 LINGO4Q6UY18 593 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 TRMT11Q7Z4G4 463 aaKnown RBP16.84■□□□□ 0.29
CAPN1-205ENST00000526954 ZC3H18Q86VM9 953 aaKnown RBP16.84■□□□□ 0.29
CAPN1-205ENST00000526954 CCDC105Q8IYK2 499 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 IL17RCQ8NAC3 791 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 CCNYQ8ND76 341 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 MAML1Q92585 1016 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 ISG20Q96AZ6 181 aaKnown RBP16.84■□□□□ 0.29
CAPN1-205ENST00000526954 QKIQ96PU8 341 aaKnown RBP eCLIP16.84■□□□□ 0.29
CAPN1-205ENST00000526954 MFSD1Q9H3U5 465 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 HOMER3Q9NSC5 361 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 RBM12Q9NTZ6 932 aaKnown RBP16.84■□□□□ 0.29
CAPN1-205ENST00000526954 SLCO3A1Q9UIG8 710 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 SIT1Q9Y3P8 196 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 A0A0C4DFX4 3053 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 CKAP5Q14008 2032 aa16.84■□□□□ 0.29
CAPN1-205ENST00000526954 CHURC1-FNTBB4DL54 471 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 LIASO43766 372 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 RNF40O75150 1001 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 RBP3P10745 1247 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 RPS9P46781 194 aaKnown RBP16.83■□□□□ 0.28
CAPN1-205ENST00000526954 IFI35P80217 286 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-205ENST00000526954 AP1B1Q10567 949 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 TUBB2AQ13885 445 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 CYP1B1Q16678 543 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 FNDC3BQ53EP0 1204 aaKnown RBP16.83■□□□□ 0.28
CAPN1-205ENST00000526954 CWF19L1Q69YN2 538 aaKnown RBP16.83■□□□□ 0.28
CAPN1-205ENST00000526954 TEX26Q8N6G2 289 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 ATP11CQ8NB49 1132 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 NSMCE1Q8WV22 266 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 ZNF592Q92610 1267 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 NKD2Q969F2 451 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-205ENST00000526954 ACOX2Q99424 681 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 GABRG3Q99928 467 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 TUBB2BQ9BVA1 445 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 CEP44Q9C0F1 390 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 DNPEPQ9ULA0 475 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 ACTL7AQ9Y615 435 aa16.83■□□□□ 0.28
CAPN1-205ENST00000526954 BCLAF3A2AJT9 711 aaKnown RBP16.82■□□□□ 0.28
CAPN1-205ENST00000526954 H7C0C1 242 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 K7ERQ8 282 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 TNFRSF10AO00220 468 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 STK25O00506 426 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms