RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 C14orf177Q52M58 125 aa2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 EFHC1Q5JVL4 640 aa2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 FAM171A1Q5VUB5 890 aa2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 TRABD2AQ86V40 505 aa2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 MYPOPQ86VE0 399 aaPredicted RBP2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 IL17RCQ8NAC3 791 aa2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 ZNF485Q8NCK3 441 aa2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 FBXO17Q96EF6 278 aa2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 TXNDC15Q96J42 360 aa2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 UHRF2Q96PU4 802 aa2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 EIF2AQ9BY44 585 aaKnown RBP2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 GOLGA6AQ9NYA3 693 aa2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 GAB2Q9UQC2 676 aa2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 PCDHAC2Q9Y5I4 1007 aa2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 COPG1Q9Y678 874 aaKnown RBP2.92□□□□□ -1.94
ECHDC1-219ENST00000526299 A0A1B0GU03 582 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 A0A1W2PPC4 97 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 EYA2O00167 538 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 APOHP02749 345 aaPredicted RBP2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 AFPP02771 609 aaKnown RBP2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 ANXA6P08133 673 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 MYZAPP0CAP1 466 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 TSHRP16473 764 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 HOXB9P17482 250 aaPredicted RBP2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 RFC1P35251 1148 aaPredicted RBP2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 ERVK11-1P61568 191 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 RBM6P78332 1123 aaKnown RBP2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 RNASELQ05823 741 aaKnown RBP2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 TROAPQ12815 778 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 DLG1Q12959 904 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 PKP1Q13835 747 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 GALEQ14376 348 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 RBBP5Q15291 538 aaKnown RBP2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 CCDC6Q16204 474 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 GFOD2Q3B7J2 385 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 VWA5B1Q5TIE3 1220 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 TYW3Q6IPR3 259 aaKnown RBP2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 RHBDF2Q6PJF5 856 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 GDPD4Q6W3E5 623 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 TRMT1LQ7Z2T5 733 aaKnown RBP2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 KLHDC8BQ8IXV7 354 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 NAGSQ8N159 534 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 MYO1HQ8N1T3 1032 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 MAB21L3Q8N8X9 362 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 LRRC8CQ8TDW0 803 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 WDR60Q8WVS4 1066 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 BICD1Q96G01 975 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 TRMT61BQ9BVS5 477 aaKnown RBP2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 TMEM120AQ9BXJ8 343 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 CA14Q9ULX7 337 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 ADAM18Q9Y3Q7 739 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 PKP3Q9Y446 797 aa2.91□□□□□ -1.94
ECHDC1-219ENST00000526299 IGKV3D-20A0A0C4DH25 116 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 A0A1B0GVM2 712 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 HLA-DQA2P01906 255 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 ANOS1P23352 680 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 MXI1P50539 228 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 FAM3BP58499 235 aaPredicted RBP2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 PHEXP78562 749 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 FCN2Q15485 313 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 XKR9Q5GH70 373 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 CYB5RLQ6IPT4 315 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 RINT1Q6NUQ1 792 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 FBXO38Q6PIJ6 1188 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 DGKHQ86XP1 1220 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 PGBD5Q8N414 524 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 ZNF114Q8NC26 417 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 TMEM163Q8TC26 289 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 SORCS1Q8WY21 1168 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 DUX3Q96PT4 197 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 MECRQ9BV79 373 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 OBP2AQ9NY56 170 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 ZBTB1Q9Y2K1 713 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 NFS1Q9Y697 457 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 EID1Q9Y6B2 187 aa2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 COL2A1P02458 1487 aaPredicted RBP2.9□□□□□ -1.95
ECHDC1-219ENST00000526299 C17orf102A2RUQ5 167 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 KDM4EB2RXH2 506 aaPredicted RBP2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 KIF28PB7ZC32 967 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 RPP40O75818 363 aaKnown RBP2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 CRYAAP02489 173 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 HARSP12081 509 aaKnown RBP2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 DGKAP23743 735 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 CASP5P51878 434 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 CTTNQ14247 550 aaKnown RBP2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 C5orf22Q49AR2 442 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 PLEKHO1Q53GL0 409 aaPredicted RBP2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 ZNF772Q68DY9 489 aaPredicted RBP2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 PLEKHA7Q6IQ23 1121 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 UNQ6126/PRO20091Q6UXV3 157 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 DGLUCYQ7Z3D6 616 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 TEX45Q8NA69 505 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 TBCBQ99426 244 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 COLEC11Q9BWP8 271 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 MMP28Q9H239 520 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 EVA1AQ9H8M9 152 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 Q9N2J8 555 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 SEL1LQ9UBV2 794 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms