RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 PIAS2O75928 621 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 ADCY5O95622 1261 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 PNMA6AP0CW24 399 aaPredicted RBP14.64□□□□□ -0.07
CPSF1-201ENST00000526271 THEGLP0DJG4 465 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 KRT5P13647 590 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 RRM1P23921 792 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 GNA15P30679 374 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 SULT2A1Q06520 285 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 KCNMA1Q12791 1236 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 SFSWAPQ12872 951 aaKnown RBP14.64□□□□□ -0.07
CPSF1-201ENST00000526271 OVGP1Q12889 678 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 TMEM259Q4ZIN3 620 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 ZNF542PQ5EBM4 170 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 TRNP1Q6NT89 227 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 FOXR2Q6PJQ5 311 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 ABI3BPQ7Z7G0 1075 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 PASD1Q8IV76 773 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 OXR1Q8N573 874 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 ATP6V0D2Q8N8Y2 350 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 TIGD1Q96MW7 591 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 RPRD1AQ96P16 312 aaPredicted RBP14.64□□□□□ -0.07
CPSF1-201ENST00000526271 CRACR2AQ9BSW2 395 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 GTPBP4Q9BZE4 634 aaKnown RBP14.64□□□□□ -0.07
CPSF1-201ENST00000526271 FAM204AQ9H8W3 233 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 SIX2Q9NPC8 291 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 ASCL3Q9NQ33 180 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 PIGVQ9NUD9 493 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 KLHL11Q9NVR0 708 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 VPS51Q9UID3 782 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 SSUH2Q9Y2M2 353 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 ACTL7AQ9Y615 435 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 WASF2Q9Y6W5 498 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 LRRK1Q38SD2 2015 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 BOD1L1Q8NFC6 3051 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 NAV2Q8IVL1 2488 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 PSMA7O14818 248 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 ALOX15BO15296 676 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 FFAR2O15552 330 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 THAP12O43422 761 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 NEBLO76041 1014 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 CD160O95971 181 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 AFPP02771 609 aaKnown RBP14.63□□□□□ -0.07
CPSF1-201ENST00000526271 MPOP05164 745 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 SLC9A1P19634 815 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 C19orf57Q0VDD7 668 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 ACCSLQ4AC99 568 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 PTPN20Q4JDL3 420 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 SLC45A4Q5BKX6 768 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 TRIM65Q6PJ69 517 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 LINGO4Q6UY18 593 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 TMC6Q7Z403 805 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 IRF2BP1Q8IU81 584 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 C1orf131Q8NDD1 294 aaKnown RBP14.63□□□□□ -0.07
CPSF1-201ENST00000526271 KLHDC7BQ96G42 594 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 APOLD1Q96LR9 279 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 CPNE5Q9HCH3 593 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 PREBQ9HCU5 417 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 ASNSD1Q9NWL6 643 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 ARHGEF38Q9NXL2 777 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 TPX2Q9ULW0 747 aaKnown RBP14.63□□□□□ -0.07
CPSF1-201ENST00000526271 AHCTF1Q8WYP5 2266 aa14.63□□□□□ -0.07
CPSF1-201ENST00000526271 FAM170AA1A519 330 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 POM121BA6NF01 834 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 SPINT1O43278 529 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 BNIP3LO60238 219 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 OPA1O60313 960 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 ZMPSTE24O75844 475 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 SMC2O95347 1197 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 CKMT1AP12532 417 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 CCR1P32246 355 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 CHRNA3P32297 505 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 FZD2Q14332 565 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 STAT4Q14765 748 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 SETMARQ53H47 684 aaPredicted RBP14.62□□□□□ -0.07
CPSF1-201ENST00000526271 RAB6CQ53S08 254 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 TTC39BQ5VTQ0 682 aaPredicted RBP14.62□□□□□ -0.07
CPSF1-201ENST00000526271 OR6B2Q6IFH4 312 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 HORMAD1Q86X24 394 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 SHC3Q92529 594 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 NT5C3BQ969T7 300 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 PRR11Q96HE9 360 aaPredicted RBP14.62□□□□□ -0.07
CPSF1-201ENST00000526271 NAF1Q96HR8 494 aaKnown RBP14.62□□□□□ -0.07
CPSF1-201ENST00000526271 PPP1R13BQ96KQ4 1090 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 NPY6RQ99463 290 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 SRRTQ9BXP5 876 aaKnown RBP14.62□□□□□ -0.07
CPSF1-201ENST00000526271 RAB6CQ9H0N0 254 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 PLCB1Q9NQ66 1216 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 VPS28Q9UK41 221 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 PCDHGC3Q9UN70 934 aa14.62□□□□□ -0.07
CPSF1-201ENST00000526271 LRP4O75096 1905 aa14.61□□□□□ -0.07
CPSF1-201ENST00000526271 DRGXA6NNA5 263 aa14.61□□□□□ -0.07
CPSF1-201ENST00000526271 K7ESM1 405 aa14.61□□□□□ -0.07
CPSF1-201ENST00000526271 BIN1O00499 593 aa14.61□□□□□ -0.07
CPSF1-201ENST00000526271 LZTS3O60299 673 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-201ENST00000526271 DAB1O75553 588 aa14.61□□□□□ -0.07
CPSF1-201ENST00000526271 GLI1P08151 1106 aa14.61□□□□□ -0.07
CPSF1-201ENST00000526271 CLCN1P35523 988 aa14.61□□□□□ -0.07
CPSF1-201ENST00000526271 NUDT1P36639 197 aa14.61□□□□□ -0.07
CPSF1-201ENST00000526271 CXCR3P49682 368 aa14.61□□□□□ -0.07
CPSF1-201ENST00000526271 CXADRP78310 365 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms