RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 CTDSP2O14595 271 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 NRP1O14786 923 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 CD3EAPO15446 510 aaKnown RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 OR2C1O95371 312 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 OLFM2O95897 454 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 FTCDO95954 541 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 TPOP07202 933 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 ABCB1P08183 1280 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 ATXN1LP0C7T5 689 aaKnown RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 SELLP14151 372 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 CHN1P15882 459 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 TFEBP19484 476 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 RBL1P28749 1068 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 LRPAP1P30533 357 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 RFC1P35251 1148 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 BMPR1AP36894 532 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 CPA2P48052 419 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 GPC3P51654 580 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 ADCY7P51828 1080 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 STAT2P52630 851 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 PTTG1IPP53801 180 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 POLGP54098 1239 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 STARD6P59095 220 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 RBM6P78332 1123 aaKnown RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 KRT17Q04695 432 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 TMEM115Q12893 351 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 RPA4Q13156 261 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 SNTB1Q13884 538 aaKnown RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 LASP1Q14847 261 aaKnown RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 NAA25Q14CX7 972 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 SF3B3Q15393 1217 aaKnown RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 ELAVL1Q15717 326 aaKnown RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 ANKDD1AQ495B1 522 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 LRRC24Q50LG9 513 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 GLRA4Q5JXX5 417 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 COLEC12Q5KU26 742 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 MFSD14BQ5SR56 506 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 MPP7Q5T2T1 576 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 HMBOX1Q6NT76 420 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 ZNF529Q6P280 563 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 CRELD2Q6UXH1 353 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 RHOUQ7L0Q8 258 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 RRM2BQ7LG56 351 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 VRK3Q8IV63 474 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 TBC1D21Q8IYX1 336 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 ZBTB8BQ8NAP8 495 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 TMEM116Q8NCL8 245 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 SPATA20Q8TB22 786 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 FBXO30Q8TB52 745 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 MDM1Q8TC05 714 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 PROKR1Q8TCW9 393 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 MR1Q95460 341 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 SMARCE1Q969G3 411 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 TRIM44Q96DX7 344 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 REXO5Q96IC2 774 aaKnown RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 CCDC114Q96M63 670 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 CFAP57Q96MR6 1250 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 BBC3Q96PG8 261 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 MYOCQ99972 504 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 NAA11Q9BSU3 229 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 MRI1Q9BV20 369 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 VPS33BQ9H267 617 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 TASP1Q9H6P5 420 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 TTC12Q9H892 705 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 IL1RAPL2Q9NP60 686 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 NRIP3Q9NQ35 241 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 MBNL1Q9NR56 388 aaKnown RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 ING3Q9NXR8 418 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 TUBE1Q9UJT0 475 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 ANAPC2Q9UJX6 822 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 ADAM18Q9Y3Q7 739 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 SNX14Q9Y5W7 946 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 EPN1Q9Y6I3 576 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 SESN1Q9Y6P5 492 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 FPGT-TNNI3KV9GXZ4 949 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 COL15A1P39059 1388 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 AOX1Q06278 1338 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 ADGRF5Q8IZF2 1346 aa3.19□□□□□ -1.9
TRAPPC4-207ENST00000526141 LOC100509620A0A075B734 347 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 LOC105369274A0A096LPK9 316 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 LOC102723532A0A0G2JNH3 316 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 LRRD1A4D1F6 860 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 E9PLN8 166 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 ZNF263O14978 683 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 SYN3O14994 580 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 SCAMP1O15126 338 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 PJA2O43164 708 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 FAM20BO75063 409 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 CBFA2T3O75081 653 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 MFAP3LO75121 409 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 PSMD10O75832 226 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 RECQL5O94762 991 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 CAMTA2O94983 1202 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 C22orf31O95567 290 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 URODP06132 367 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 FYNP06241 537 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 SNRPA1P09661 255 aaKnown RBP3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 KRT13P13646 458 aa3.18□□□□□ -1.9
TRAPPC4-207ENST00000526141 ACP5P13686 325 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms