RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 ZNF366Q8N895 744 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 FAM47BQ8NA70 645 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 DENND1AQ8TEH3 1009 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 RILPL2Q969X0 211 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 ARRDC3Q96B67 414 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 GCC1Q96CN9 775 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 ZNF48Q96MX3 618 aaPredicted RBP4.27□□□□□ -1.73
CD44-219ENST00000525685 FCRL5Q96RD9 977 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 TRIM31Q9BZY9 425 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 KLHL13Q9P2N7 655 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 SUFUQ9UMX1 484 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 DERAQ9Y315 318 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 COPG1Q9Y678 874 aaKnown RBP4.27□□□□□ -1.73
CD44-219ENST00000525685 LRP6O75581 1613 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 NRKQ7Z2Y5 1582 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 USP47Q96K76 1375 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 ABCA3Q99758 1704 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 CRYBG1Q9Y4K1 1723 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 ALS2Q96Q42 1657 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 KCNU1A8MYU2 1149 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 EIF3FO00303 357 aaPredicted RBP4.26□□□□□ -1.73
CD44-219ENST00000525685 CCNT1O60563 726 aaKnown RBP4.26□□□□□ -1.73
CD44-219ENST00000525685 BCAR3O75815 825 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 CNTN5O94779 1100 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 KAT7O95251 611 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 PLAUP00749 431 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 TFRCP02786 760 aaKnown RBP4.26□□□□□ -1.73
CD44-219ENST00000525685 ITGB6P18564 788 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 TGM2P21980 687 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 CIITAP33076 1130 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 OAZ1P54368 228 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 SLC12A2P55011 1212 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 ANKRD1Q15327 319 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 SLC9C1Q4G0N8 1177 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 FBXO47Q5MNV8 452 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 RHPN2Q8IUC4 686 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 SUGP1Q8IWZ8 645 aaKnown RBP4.26□□□□□ -1.73
CD44-219ENST00000525685 PRSS3P2Q8NHM4 247 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 SPPL3Q8TCT6 385 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 PNISRQ8TF01 805 aaKnown RBP4.26□□□□□ -1.73
CD44-219ENST00000525685 MAP4K1Q92918 833 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 SDCCAG3Q96C92 435 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 FCRL4Q96PJ5 515 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 SCNM1Q9BWG6 230 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 CLPBQ9H078 707 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 WDR26Q9H7D7 661 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 RMI1Q9H9A7 625 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 RIC8AQ9NPQ8 531 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 RRN3Q9NYV6 651 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 SEMA5BQ9P283 1151 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 FEM1BQ9UK73 627 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 TNFSF13BQ9Y275 285 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 AKAP12Q02952 1782 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 MON2Q7Z3U7 1717 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 PNPLA6Q8IY17 1366 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 JCADQ9P266 1359 aa4.26□□□□□ -1.73
CD44-219ENST00000525685 NPHP3Q7Z494 1330 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 ZNF521Q96K83 1311 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 CYP3A7-CYP3A51PA0A087WV96 503 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 C16orf96A6NNT2 1141 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 B9A039 149 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 STX16-NPEPL1H3BU86 382 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 GRM8O00222 908 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 STX16O14662 325 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 RRHO14718 337 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 SYN3O14994 580 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 FAM155BO75949 473 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 HEXIM1O94992 359 aaKnown RBP4.25□□□□□ -1.73
CD44-219ENST00000525685 TK1P04183 234 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 TFEBP19484 476 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 CYP3A7P24462 503 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 GSTM2P28161 218 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 ZNF84P51523 738 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 FOXL2P58012 376 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 HSF1Q00613 529 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 ZNF91Q05481 1191 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 CDK18Q07002 472 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 SMAD1Q15797 465 aaKnown RBP4.25□□□□□ -1.73
CD44-219ENST00000525685 CTXN3Q4LDR2 81 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 C10orf76Q5T2E6 689 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 TNS3Q68CZ2 1445 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 PPIP5K1Q6PFW1 1433 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 RBM44Q6ZP01 1051 aaKnown RBP4.25□□□□□ -1.73
CD44-219ENST00000525685 ANKS1BQ7Z6G8 1248 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 VPS52Q8N1B4 723 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 STAMQ92783 540 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 ADAD1Q96M93 576 aaKnown RBP4.25□□□□□ -1.73
CD44-219ENST00000525685 CDK19Q9BWU1 502 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 TM2D2Q9BX73 214 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 PLEKHA2Q9HB19 425 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 ERVK-5Q9HDB9 667 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 G6PC2Q9NQR9 355 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 GPR52Q9Y2T5 361 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 MYOM1P52179 1685 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 POLR3AO14802 1390 aaPredicted RBP4.25□□□□□ -1.73
CD44-219ENST00000525685 DISP3Q9P2K9 1392 aa4.25□□□□□ -1.73
CD44-219ENST00000525685 PHRF1Q9P1Y6 1649 aaKnown RBP4.24□□□□□ -1.73
CD44-219ENST00000525685 CD163L1Q9NR16 1453 aa4.24□□□□□ -1.73
CD44-219ENST00000525685 SPATA31A5Q5VU36 1347 aa4.24□□□□□ -1.73
CD44-219ENST00000525685 EVC2Q86UK5 1308 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms