RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	ANXA1	P04083	346 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	CNP	P09543	421 aa	Known RBP	4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	NR2F1	P10589	423 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	EGR1	P18146	543 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	FPR1	P21462	350 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	PRDX5	P30044	214 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	KIF5B	P33176	963 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	GUCY1A2	P33402	732 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	DPP6	P42658	865 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	AARS	P49588	968 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	RAB39A	Q14964	217 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	TBCC	Q15814	346 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	MMEL1	Q495T6	779 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	C1orf141	Q5JVX7	400 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	TMTC4	Q5T4D3	741 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	IL27RA	Q6UWB1	636 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	UNC5D	Q6UXZ4	953 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	IRF2BP2	Q7Z5L9	587 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	ANKS1B	Q7Z6G8	1248 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	SRBD1	Q8N5C6	995 aa	Known RBP	4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	NRAC	Q8N912	160 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	KCTD6	Q8NC69	237 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	OR56A3	Q8NH54	315 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	GOT1L1	Q8NHS2	421 aa	Predicted RBP	4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	FAM120B	Q96EK7	910 aa	Known RBP	4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	C2orf40	Q9H1Z8	148 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	SEPT11	Q9NVA2	429 aa	Known RBP	4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	VSX1	Q9NZR4	365 aa	Predicted RBP	4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	EPS15L1	Q9UBC2	864 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	HSF4	Q9ULV5	492 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	PIK3C2A	O00443	1686 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	SMIM35	A0A1B0GVV1	85 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	PYCARD-AS1	I3L0S3	204 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	F2RL2	O00254	374 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	KRT86	O43790	486 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	GOSR1	O95249	250 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	SLC4A1	P02730	911 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	CSH1	P0DML2	217 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	CSH2	P0DML3	217 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	TXN	P10599	105 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	ALAS1	P13196	640 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	PECAM1	P16284	738 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	MT3	P25713	68 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	HPD	P32754	393 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	HADHA	P40939	763 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	TDO2	P48775	406 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	THBS3	P49746	956 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	PLCD1	P51178	756 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	CLCN2	P51788	898 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	PPP5C	P53041	499 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	HSD17B7	P56937	341 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	NANOS2	P60321	138 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	PSMC1	P62191	440 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	LRMP	Q12912	555 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	KRT81	Q14533	505 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	GLIPR1L2	Q4G1C9	344 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	EMC10	Q5UCC4	262 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	RAP1GAP2	Q684P5	730 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	CRTC1	Q6UUV9	634 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	KIAA0408	Q6ZU52	694 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	PRPF39	Q86UA1	669 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	RSPH3	Q86UC2	560 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	ARMC8	Q8IUR7	673 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	EPHX4	Q8IUS5	362 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	ADSSL1	Q8N142	457 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	OR8H3	Q8N146	312 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	ZGPAT	Q8N5A5	531 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	TMEM57	Q8N5G2	664 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	OR6Y1	Q8NGX8	325 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	NSMCE1	Q8WV22	266 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	SDCCAG3	Q96C92	435 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	REPS1	Q96D71	796 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	SNX27	Q96L92	541 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	TRAPPC9	Q96Q05	1148 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	PPP1R9B	Q96SB3	815 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	EYA3	Q99504	573 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	EDEM3	Q9BZQ6	932 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	PCDHAC1	Q9H158	963 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	TSPY26P	Q9H489	355 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	EPS8L2	Q9H6S3	715 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	SYNC	Q9H7C4	482 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	XAB2	Q9HCS7	855 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	G6PC2	Q9NQR9	355 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	EIF2B3	Q9NR50	452 aa	Known RBP	4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	PDRG1	Q9NUG6	133 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	CALCOCO1	Q9P1Z2	691 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	WDR35	Q9P2L0	1181 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	PI4KB	Q9UBF8	816 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	MID2	Q9UJV3	735 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	PSAT1	Q9Y617	370 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	FLT1	P17948	1338 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	MAP3K19	Q56UN5	1328 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	PASK	Q96RG2	1323 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	CLSPN	Q9HAW4	1339 aa		4.6	□□□□□ -1.67
PCM1-223	ENST00000524356	PALLD	Q8WX93	1383 aa		4.6	□□□□□ -1.67

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