RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 MCF2LO15068 1137 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 MAP3K13O43283 966 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 RASA4O43374 803 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 FOXD2O60548 495 aaPredicted RBP12.82□□□□□ -0.36
VEGFA-225ENST00000523950 EPN2O95208 641 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 TCF4P15884 667 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 C5AR1P21730 350 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 CD6P30203 668 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 HOXD11P31277 338 aaPredicted RBP12.82□□□□□ -0.36
VEGFA-225ENST00000523950 SERPINB6P35237 376 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 ACVRL1P37023 503 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 RECQLP46063 649 aaPredicted RBP12.82□□□□□ -0.36
VEGFA-225ENST00000523950 TPMTP51580 245 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 DPYSQ14117 519 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 KRT81Q14533 505 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 CST6Q15828 149 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 INO80DQ53TQ3 878 aaPredicted RBP12.82□□□□□ -0.36
VEGFA-225ENST00000523950 LRRC38Q5VT99 294 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 FAM46CQ5VWP2 391 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 C22orf39Q6P5X5 142 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 VSIG1Q86XK7 387 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 MAP7D3Q8IWC1 876 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 PLPP6Q8IY26 295 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 RLN3Q8WXF3 142 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 TSC1Q92574 1164 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 CSPG4P5Q96PW8 444 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 ZNF670Q9BS34 389 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 PCED1AQ9H1Q7 454 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 SLC6A17Q9H1V8 727 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 PABPC3Q9H361 631 aaKnown RBP12.82□□□□□ -0.36
VEGFA-225ENST00000523950 NOL6Q9H6R4 1146 aaKnown RBP12.82□□□□□ -0.36
VEGFA-225ENST00000523950 CYP8B1Q9UNU6 501 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 NCKAP1Q9Y2A7 1128 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 TNRC6BQ9UPQ9 1833 aaKnown RBP12.82□□□□□ -0.36
VEGFA-225ENST00000523950 BTNL10A8MVZ5 291 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 ZNF487B1APH4 448 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 C1QTNF3-AMACRE9PGA6 284 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 DCLK1O15075 740 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 MT-CO1P00395 513 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 BCKDHBP21953 392 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 GLDCP23378 1020 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 NOP2P46087 812 aaKnown RBP12.81□□□□□ -0.36
VEGFA-225ENST00000523950 ARSEP51690 589 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 CDH6P55285 790 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 SERINC3Q13530 473 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 HS1BP3Q53T59 392 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 AFMIDQ63HM1 303 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 TXNRD3NBQ6F5E7 133 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 TMCO3Q6UWJ1 677 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 LINGO4Q6UY18 593 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 RAD9BQ6WBX8 426 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 Q6ZVU0 165 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 ALYREFQ86V81 257 aaKnown RBP12.81□□□□□ -0.36
VEGFA-225ENST00000523950 ZNF354CQ86Y25 554 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 TMEM139Q8IV31 216 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 STK40Q8N2I9 435 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 CCDC112Q8NEF3 446 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 CADM4Q8NFZ8 388 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 FOXJ1Q92949 421 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 ERLEC1Q96DZ1 483 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 HMCESQ96FZ2 354 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 FAM129BQ96TA1 746 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 MTG2Q9H4K7 406 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 SGK2Q9HBY8 427 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 WSB2Q9NYS7 404 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-225ENST00000523950 MBD1Q9UIS9 605 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-225ENST00000523950 FZD4Q9ULV1 537 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 INVSQ9Y283 1065 aa12.81□□□□□ -0.36
VEGFA-225ENST00000523950 NUP205Q92621 2012 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 TMEM110-MUSTN1A8MSY1 372 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 PJA2O43164 708 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 SLC7A4O43246 635 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 BUB1O43683 1085 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 NDUFS2O75306 463 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 IL1BP01584 269 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 PRNPP04156 253 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 SLC8A1P32418 973 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 HOXD12P35452 270 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 NUMBP49757 651 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 VAV2P52735 878 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 TAS2R40P59535 323 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 RPL6Q02878 288 aaKnown RBP12.8□□□□□ -0.36
VEGFA-225ENST00000523950 CCDC15Q0P6D6 951 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 LPAL2Q16609 132 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 C11orf63Q6NUN7 778 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 MMAAQ8IVH4 418 aaKnown RBP12.8□□□□□ -0.36
VEGFA-225ENST00000523950 RHOT1Q8IXI2 618 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 KCTD6Q8NC69 237 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 OR2A12Q8NGT7 310 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 TOE1Q96GM8 510 aaKnown RBP12.8□□□□□ -0.36
VEGFA-225ENST00000523950 LRIG1Q96JA1 1093 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 HINFPQ9BQA5 517 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 KLC2Q9H0B6 622 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 BTBD1Q9H0C5 482 aa12.8□□□□□ -0.36
VEGFA-225ENST00000523950 DDX56Q9NY93 547 aaKnown RBP12.8□□□□□ -0.36
VEGFA-225ENST00000523950 TPX2Q9ULW0 747 aaKnown RBP12.8□□□□□ -0.36
VEGFA-225ENST00000523950 K7ERQ8 282 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 MID1O15344 667 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 SMAD6O43541 496 aaKnown RBP12.79□□□□□ -0.36
VEGFA-225ENST00000523950 PSTPIP1O43586 416 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms