RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 CCT5P48643 541 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 PAPOLAP51003 745 aaKnown RBP6.5□□□□□ -1.37
CPNE3-206ENST00000523469 ETFDHQ16134 617 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 LRRC24Q50LG9 513 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 PXDC1Q5TGL8 231 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 ISM2Q6H9L7 571 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 C2CD5Q86YS7 1000 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 HERC6Q8IVU3 1022 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 EXOC8Q8IYI6 725 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 C1QTNF7Q9BXJ2 289 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 HDHD5Q9BXW7 423 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 MYH16Q9H6N6 1097 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 SLC25A13Q9UJS0 675 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 AGO2Q9UKV8 859 aaKnown RBP6.5□□□□□ -1.37
CPNE3-206ENST00000523469 DGKBQ9Y6T7 804 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 MYO5BQ9ULV0 1848 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 NCOA3Q9Y6Q9 1424 aa6.5□□□□□ -1.37
CPNE3-206ENST00000523469 CCNB3Q8WWL7 1395 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 NPIPB13A6NJU9 1138 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 NPIPB5A8MRT5 1133 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 NPIPB4C9JG80 1138 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 ACP5P13686 325 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 PKMP14618 531 aaKnown RBP6.49□□□□□ -1.37
CPNE3-206ENST00000523469 RXRAP19793 462 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 PNPLA4P41247 253 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 ZNF81P51508 661 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 THOC5Q13769 683 aaKnown RBP6.49□□□□□ -1.37
CPNE3-206ENST00000523469 MIDNQ504T8 468 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 ZNF484Q5JVG2 852 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 SHC4Q6S5L8 630 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 CYB5R4Q7L1T6 521 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 KLBQ86Z14 1044 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 NANOGP1Q8N7R0 232 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 KCNJ9Q92806 393 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 CLMNQ96JQ2 1002 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 ZSCAN31Q96LW9 406 aaPredicted RBP6.49□□□□□ -1.37
CPNE3-206ENST00000523469 PYM1Q9BRP8 204 aaKnown RBP6.49□□□□□ -1.37
CPNE3-206ENST00000523469 TRIM31Q9BZY9 425 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 CLPBQ9H078 707 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 EIF2AK4Q9P2K8 1649 aaKnown RBP6.49□□□□□ -1.37
CPNE3-206ENST00000523469 PTCH1Q13635 1447 aa6.49□□□□□ -1.37
CPNE3-206ENST00000523469 TRBV5-3A0A0A0MS03 114 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 KIR2DS5A0A0G2JLQ3 304 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 KIR2DS3K7RE56 304 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 MSI1O43347 362 aaKnown RBP6.48□□□□□ -1.37
CPNE3-206ENST00000523469 WNT1P04628 370 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 CYP19A1P11511 503 aaPredicted RBP6.48□□□□□ -1.37
CPNE3-206ENST00000523469 PPM1FP49593 454 aaPredicted RBP6.48□□□□□ -1.37
CPNE3-206ENST00000523469 SRSF1Q07955 248 aaKnown RBP eCLIP6.48□□□□□ -1.37
CPNE3-206ENST00000523469 GALNT3Q14435 633 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 RBMS2Q15434 407 aaKnown RBP6.48□□□□□ -1.37
CPNE3-206ENST00000523469 CTXN3Q4LDR2 81 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 C11orf87Q6NUJ2 197 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 MTFR2Q6P444 385 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 SLC30A9Q6PML9 568 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 C1QL2Q7Z5L3 287 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 MRPL10Q7Z7H8 261 aaKnown RBP6.48□□□□□ -1.37
CPNE3-206ENST00000523469 SLC44A5Q8NCS7 719 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 MYRIPQ8NFW9 859 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 CEP70Q8NHQ1 597 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 FAM110DQ8TAY7 271 aaPredicted RBP6.48□□□□□ -1.37
CPNE3-206ENST00000523469 GCC1Q96CN9 775 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 ZFYVE19Q96K21 471 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 NOD2Q9HC29 1040 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 ARL15Q9NXU5 204 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 LUZP4Q9P127 313 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 UTS2RQ9UKP6 389 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 LAMP3Q9UQV4 416 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 GLI3P10071 1580 aa6.48□□□□□ -1.37
CPNE3-206ENST00000523469 ARHGAP35Q9NRY4 1499 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 CXorf65A6NEN9 183 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 SAC3D1A6NKF1 404 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 PPEF2O14830 753 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 TLX3O43711 291 aaPredicted RBP6.47□□□□□ -1.37
CPNE3-206ENST00000523469 CCNT1O60563 726 aaKnown RBP6.47□□□□□ -1.37
CPNE3-206ENST00000523469 CSF1P09603 554 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 TNNT1P13805 278 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 CIITAP33076 1130 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 RPS6KA3P51812 740 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 BIRC3Q13489 604 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 SEMA3AQ14563 771 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 DLGAP5Q15398 846 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 GXYLT1Q4G148 440 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 ARL13AQ5H913 290 aaPredicted RBP6.47□□□□□ -1.37
CPNE3-206ENST00000523469 ZNF354CQ86Y25 554 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 SCN4BQ8IWT1 228 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.47□□□□□ -1.37
CPNE3-206ENST00000523469 DDIASQ8IXT1 998 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 IP6K1Q92551 441 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 ZNF778Q96MU6 729 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 TRMOQ9BU70 441 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 HERC2P3Q9BVR0 1158 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 SPRTNQ9H040 489 aaPredicted RBP6.47□□□□□ -1.37
CPNE3-206ENST00000523469 RMI1Q9H9A7 625 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 KLQ9UEF7 1012 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 FBXO4Q9UKT5 387 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 RRP7AQ9Y3A4 280 aaKnown RBP6.47□□□□□ -1.37
CPNE3-206ENST00000523469 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.47□□□□□ -1.37
CPNE3-206ENST00000523469 CCDC141Q6ZP82 1450 aa6.47□□□□□ -1.37
CPNE3-206ENST00000523469 NINLQ9Y2I6 1382 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms