RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 CCDC173Q0VFZ6 552 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 SMARCB1Q12824 385 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 NUMA1Q14980 2115 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 TMEM132DQ14C87 1099 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 TAF1BQ53T94 588 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-211ENST00000522802 BMP2KLQ5H9B9 411 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 WDR45BQ5MNZ6 344 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 LY6G5CQ5SRR4 150 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 SYCP2LQ5T4T6 812 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 CPLX2Q6PUV4 134 aaKnown RBP6.72□□□□□ -1.33
VPS13B-211ENST00000522802 KIAA1324Q6UXG2 1013 aaKnown RBP6.72□□□□□ -1.33
VPS13B-211ENST00000522802 DBX2Q6ZNG2 339 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 RUFY3Q7L099 469 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 TMC6Q7Z403 805 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 KCNK18Q7Z418 384 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 KIAA0907Q7Z7F0 614 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-211ENST00000522802 MTDHQ86UE4 582 aaKnown RBP6.72□□□□□ -1.33
VPS13B-211ENST00000522802 ERICH1Q86X53 443 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 METTL23Q86XA0 190 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 DCP2Q8IU60 420 aaKnown RBP6.72□□□□□ -1.33
VPS13B-211ENST00000522802 ADGRG2Q8IZP9 1017 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 THEM5Q8N1Q8 247 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 TERB1Q8NA31 727 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 ERMNQ8TAM6 284 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 IPO4Q8TEX9 1081 aaKnown RBP6.72□□□□□ -1.33
VPS13B-211ENST00000522802 LEO1Q8WVC0 666 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-211ENST00000522802 DNASE2BQ8WZ79 361 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 SEC14L1Q92503 715 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 ZNF274Q96GC6 653 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-211ENST00000522802 FAM84AQ96KN4 292 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 TRIM9Q9C026 710 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 TRIM4Q9C037 500 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 RNF38Q9H0F5 515 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 IPPKQ9H8X2 491 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 PCDHGB2Q9Y5G2 931 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 CPQQ9Y646 472 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 SPTAN1Q13813 2472 aaKnown RBP6.72□□□□□ -1.33
VPS13B-211ENST00000522802 KNTC1P50748 2209 aa6.72□□□□□ -1.33
VPS13B-211ENST00000522802 CKAP5Q14008 2032 aa6.71□□□□□ -1.33
VPS13B-211ENST00000522802 PLXNA2O75051 1894 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 TBC1D3BA6NDS4 549 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 PP2D1A8MPX8 630 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-211ENST00000522802 KCNJ18B7U540 433 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 B8ZZF3 427 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 E9PAM4 449 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 BCAT2O15382 392 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-211ENST00000522802 BRINP1O60477 761 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 SEMA7AO75326 666 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 CDKL5O76039 1030 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 OLFM2O95897 454 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 OAS1P00973 400 aaKnown RBP6.71□□□□□ -1.34
VPS13B-211ENST00000522802 ADRB2P07550 413 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 OR52Z1P0C646 297 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 NCAM1P13591 858 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 FDPSP14324 419 aaKnown RBP6.71□□□□□ -1.34
VPS13B-211ENST00000522802 CD6P30203 668 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 NTSR1P30989 418 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 TAF6P49848 677 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 RPL10AP62906 217 aaKnown RBP6.71□□□□□ -1.34
VPS13B-211ENST00000522802 SLC7A9P82251 487 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 TSPY1Q01534 308 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 PDIA5Q14554 519 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 EMC4Q5J8M3 183 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 DCAF12L1Q5VU92 463 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 HAUS3Q68CZ6 603 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 SDE2Q6IQ49 451 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 TRMT11Q7Z4G4 463 aaKnown RBP6.71□□□□□ -1.34
VPS13B-211ENST00000522802 BRAPQ7Z569 592 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 FGD2Q7Z6J4 655 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 CACUL1Q86Y37 369 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 SCN4BQ8IWT1 228 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 DIS3L2Q8IYB7 885 aaKnown RBP6.71□□□□□ -1.34
VPS13B-211ENST00000522802 CHPFQ8IZ52 775 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 DCP1BQ8IZD4 617 aaKnown RBP6.71□□□□□ -1.34
VPS13B-211ENST00000522802 PDCL2Q8N4E4 241 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 KCNN1Q92952 543 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 BICD1Q96G01 975 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 TOE1Q96GM8 510 aaKnown RBP6.71□□□□□ -1.34
VPS13B-211ENST00000522802 GPR174Q9BXC1 333 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 CCSER1Q9C0I3 900 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 CNTD2Q9H8S5 307 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 RPF1Q9H9Y2 349 aaKnown RBP6.71□□□□□ -1.34
VPS13B-211ENST00000522802 CPNE5Q9HCH3 593 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 GCM1Q9NP62 436 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 SIRT5Q9NXA8 310 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 USP36Q9P275 1121 aaKnown RBP6.71□□□□□ -1.34
VPS13B-211ENST00000522802 ORC3Q9UBD5 711 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-211ENST00000522802 GTF3C4Q9UKN8 822 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 L1RE1Q9UN81 338 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 NBPF19A0A087WUL8 3843 aa6.71□□□□□ -1.34
VPS13B-211ENST00000522802 MYH10P35580 1976 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 TCRBV16S1A1N1A0A5B0 115 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 CAPN8A6NHC0 703 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 KPNA7A9QM74 516 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 TISP43B9A030 160 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 WASH3PC4AMC7 463 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 PRRT4C9JH25 899 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 KCNK3O14649 394 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 HGSO14964 777 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms