RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 KANSL1LA0AUZ9 987 aa24.64■■□□□ 1.53
PVT1-212ENST00000521951 DCXO43602 365 aa24.64■■□□□ 1.53
PVT1-212ENST00000521951 PEX11BO96011 259 aa24.64■■□□□ 1.53
PVT1-212ENST00000521951 ZNF33AQ06730 810 aa24.64■■□□□ 1.53
PVT1-212ENST00000521951 SLC20A2Q08357 652 aa24.64■■□□□ 1.53
PVT1-212ENST00000521951 SNX1Q13596 522 aa24.64■■□□□ 1.53
PVT1-212ENST00000521951 PTPRNQ16849 979 aa24.64■■□□□ 1.53
PVT1-212ENST00000521951 SLC45A4Q5BKX6 768 aa24.64■■□□□ 1.53
PVT1-212ENST00000521951 TIGD7Q6NT04 549 aaPredicted RBP24.64■■□□□ 1.53
PVT1-212ENST00000521951 ZNF687Q8N1G0 1237 aa24.64■■□□□ 1.53
PVT1-212ENST00000521951 HOMER3Q9NSC5 361 aa24.64■■□□□ 1.53
PVT1-212ENST00000521951 UBA2Q9UBT2 640 aaPredicted RBP24.64■■□□□ 1.53
PVT1-212ENST00000521951 MRPS17Q9Y2R5 130 aaKnown RBP24.64■■□□□ 1.53
PVT1-212ENST00000521951 CXorf51AA0A1B0GTR3 108 aa24.63■■□□□ 1.53
PVT1-212ENST00000521951 MATN3O15232 486 aa24.63■■□□□ 1.53
PVT1-212ENST00000521951 SRPRAP08240 638 aaKnown RBP24.63■■□□□ 1.53
PVT1-212ENST00000521951 KIR2DL1P43626 348 aaPredicted RBP24.63■■□□□ 1.53
PVT1-212ENST00000521951 SEC13P55735 322 aa24.63■■□□□ 1.53
PVT1-212ENST00000521951 SIGLEC14Q08ET2 396 aa24.63■■□□□ 1.53
PVT1-212ENST00000521951 TUBB2AQ13885 445 aa24.63■■□□□ 1.53
PVT1-212ENST00000521951 CCINQ13939 588 aa24.63■■□□□ 1.53
PVT1-212ENST00000521951 DNTTIP2Q5QJE6 756 aaKnown RBP24.63■■□□□ 1.53
PVT1-212ENST00000521951 DARS2Q6PI48 645 aaKnown RBP24.63■■□□□ 1.53
PVT1-212ENST00000521951 TUBB2BQ9BVA1 445 aa24.63■■□□□ 1.53
PVT1-212ENST00000521951 LTB4R2Q9NPC1 389 aa24.63■■□□□ 1.53
PVT1-212ENST00000521951 THAP10Q9P2Z0 257 aaPredicted RBP24.63■■□□□ 1.53
PVT1-212ENST00000521951 SLCO3A1Q9UIG8 710 aa24.63■■□□□ 1.53
PVT1-212ENST00000521951 PLA2G4CQ9UP65 541 aa24.63■■□□□ 1.53
PVT1-212ENST00000521951 HS3ST2Q9Y278 367 aa24.63■■□□□ 1.53
PVT1-212ENST00000521951 MRFAP1Q9Y605 127 aa24.63■■□□□ 1.53
PVT1-212ENST00000521951 VAV1P15498 845 aa24.62■■□□□ 1.53
PVT1-212ENST00000521951 TARSP26639 723 aaKnown RBP24.62■■□□□ 1.53
PVT1-212ENST00000521951 GEMIN4P57678 1058 aaKnown RBP24.62■■□□□ 1.53
PVT1-212ENST00000521951 BYSLQ13895 437 aaKnown RBP24.62■■□□□ 1.53
PVT1-212ENST00000521951 OASLQ15646 514 aaKnown RBP24.62■■□□□ 1.53
PVT1-212ENST00000521951 EGFLAMQ63HQ2 1017 aa24.62■■□□□ 1.53
PVT1-212ENST00000521951 DRICH1Q6PGQ1 229 aaPredicted RBP24.62■■□□□ 1.53
PVT1-212ENST00000521951 CDKL3Q8IVW4 592 aaPredicted RBP24.62■■□□□ 1.53
PVT1-212ENST00000521951 FATE1Q969F0 183 aa24.62■■□□□ 1.53
PVT1-212ENST00000521951 NKD2Q969F2 451 aaPredicted RBP24.62■■□□□ 1.53
PVT1-212ENST00000521951 MYO19Q96H55 970 aa24.62■■□□□ 1.53
PVT1-212ENST00000521951 ZNF599Q96NL3 588 aa24.62■■□□□ 1.53
PVT1-212ENST00000521951 NELL2Q99435 816 aa24.62■■□□□ 1.53
PVT1-212ENST00000521951 TBC1D17Q9HA65 648 aa24.62■■□□□ 1.53
PVT1-212ENST00000521951 MTF2Q9Y483 593 aaPredicted RBP24.62■■□□□ 1.53
PVT1-212ENST00000521951 VCANP13611 3396 aa24.62■■□□□ 1.53
PVT1-212ENST00000521951 GOLGA6L10A0A0M3HER8 536 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 BCLAF3A2AJT9 711 aaKnown RBP24.61■■□□□ 1.53
PVT1-212ENST00000521951 K7ERQ8 282 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 SMAD6O43541 496 aaKnown RBP24.61■■□□□ 1.53
PVT1-212ENST00000521951 CHRM1P11229 460 aaPredicted RBP24.61■■□□□ 1.53
PVT1-212ENST00000521951 SRCP12931 536 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 HNRNPLP14866 589 aaKnown RBP eCLIP24.61■■□□□ 1.532e-22■■□□□ 14.5
PVT1-212ENST00000521951 RBL1P28749 1068 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 SERPINH1P50454 418 aaKnown RBP24.61■■□□□ 1.53
PVT1-212ENST00000521951 VASPP50552 380 aaPredicted RBP24.61■■□□□ 1.53
PVT1-212ENST00000521951 CLCN6P51797 869 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 ZNF234Q14588 700 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 UBXN2BQ14CS0 331 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 CYP1B1Q16678 543 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 WHAMMP3Q1A5X7 153 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 FBXO43Q4G163 708 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 INO80DQ53TQ3 878 aaPredicted RBP24.61■■□□□ 1.53
PVT1-212ENST00000521951 SH2D3CQ8N5H7 860 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 ATP11CQ8NB49 1132 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 MAML1Q92585 1016 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 MAGOHBQ96A72 148 aaKnown RBP24.61■■□□□ 1.53
PVT1-212ENST00000521951 FOXQ1Q9C009 403 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 ZDHHC4Q9NPG8 344 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 RBM12Q9NTZ6 932 aaKnown RBP24.61■■□□□ 1.53
PVT1-212ENST00000521951 BDP1A6H8Y1 2624 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 KCNK1O00180 336 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 CHRNB1P11230 501 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 TIE1P35590 1138 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 SLC10A7Q0GE19 358 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 HNRNPDQ14103 355 aaKnown RBP24.61■■□□□ 1.53
PVT1-212ENST00000521951 CYTH1Q15438 398 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 TMCO4Q5TGY1 634 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 ZNF513Q8N8E2 541 aaPredicted RBP24.61■■□□□ 1.53
PVT1-212ENST00000521951 C12orf50Q8NA57 414 aaPredicted RBP24.61■■□□□ 1.53
PVT1-212ENST00000521951 NSMCE1Q8WV22 266 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 HTR3CQ8WXA8 447 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 ACOX2Q99424 681 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 USP29Q9HBJ7 922 aa24.61■■□□□ 1.53
PVT1-212ENST00000521951 DRG1Q9Y295 367 aaKnown RBP24.61■■□□□ 1.53
PVT1-212ENST00000521951 MUC22E2RYF6 1773 aaPredicted RBP24.6■■□□□ 1.53
PVT1-212ENST00000521951 FAM170BA6NMN3 283 aa24.6■■□□□ 1.53
PVT1-212ENST00000521951 CCNB1P14635 433 aa24.6■■□□□ 1.53
PVT1-212ENST00000521951 NNMTP40261 264 aa24.6■■□□□ 1.53
PVT1-212ENST00000521951 ST8SIA6P61647 398 aa24.6■■□□□ 1.53
PVT1-212ENST00000521951 RFTN1Q14699 578 aaPredicted RBP24.6■■□□□ 1.53
PVT1-212ENST00000521951 LBRQ14739 615 aaKnown RBP24.6■■□□□ 1.53
PVT1-212ENST00000521951 FNDC3BQ53EP0 1204 aaKnown RBP24.6■■□□□ 1.53
PVT1-212ENST00000521951 C2orf27AQ580R0 203 aa24.6■■□□□ 1.53
PVT1-212ENST00000521951 DGKKQ5KSL6 1271 aa24.6■■□□□ 1.53
PVT1-212ENST00000521951 FAM182AQ5T1J6 154 aa24.6■■□□□ 1.53
PVT1-212ENST00000521951 HEATR6Q6AI08 1181 aaKnown RBP24.6■■□□□ 1.53
PVT1-212ENST00000521951 KDM1BQ8NB78 822 aa24.6■■□□□ 1.53
PVT1-212ENST00000521951 KCNV2Q8TDN2 545 aa24.6■■□□□ 1.53
PVT1-212ENST00000521951 USP33Q8TEY7 942 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms