RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 FOXP3Q9BZS1 431 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 PREBQ9HCU5 417 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 FZD3Q9NPG1 666 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 ZNF358Q9NW07 568 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 EXOC7Q9UPT5 735 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 PCDHA5Q9Y5H7 936 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 TACC2O95359 2948 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 ABCA2Q9BZC7 2435 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 SHANK1Q9Y566 2161 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 ITIH6Q6UXX5 1313 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 GOLGA6L7A0A1B0GV03 622 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 CDC14CA4D256 554 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 NEMP2A6NFY4 417 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 C9orf172C9J069 976 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 K7EM74 188 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 MUSKO15146 869 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 PRKCGP05129 697 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 DLATP10515 647 aaKnown RBP9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 RALAP11233 206 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 ITIH1P19827 911 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 GNLYP22749 145 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 ADORA2BP29275 332 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 NUDT1P36639 197 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 NDST1P52848 882 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 OXCT1P55809 520 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 CLDN10P78369 228 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 FZD2Q14332 565 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 ANKRD1Q15327 319 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 ZNF284Q2VY69 593 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 DEFB133Q30KQ1 61 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 FSCBQ5H9T9 825 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 TPRG1LQ5T0D9 272 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 ADGRF1Q5T601 910 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 RFWD3Q6PCD5 774 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 GCNT7Q6ZNI0 430 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 RIPOR1Q6ZS17 1223 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 BHLHA9Q7RTU4 235 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 ABI3BPQ7Z7G0 1075 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 SLC35F3Q8IY50 421 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 KDM1BQ8NB78 822 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 ZSCAN1Q8NBB4 408 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 IFT43Q96FT9 208 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 BMFQ96LC9 184 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 TWNKQ96RR1 684 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 BOCQ9BWV1 1114 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 VRTNQ9H8Y1 702 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 PISDQ9UG56 409 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 ERVW-1Q9UQF0 538 aa9.17□□□□□ -0.94
TRAPPC9-212ENST00000521944 EDDM13A0A1B0GTR0 161 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 A0A1W2PQM1 296 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 SLC26A4O43511 780 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 GCATO75600 419 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 GCNT3O95395 438 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 IL1BP01584 269 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 FAM200BP0CF97 657 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 SLC6A4P31645 630 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 GMPRP36959 345 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 ARSDP51689 593 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 CNTN1Q12860 1018 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 SURF1Q15526 300 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 SETMARQ53H47 684 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 FHL5Q5TD97 284 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 PIK3R6Q5UE93 754 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 SCARA5Q6ZMJ2 495 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 Q6ZSR6 202 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 TADA2BQ86TJ2 420 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 SYCP3Q8IZU3 236 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 FIBINQ8TAL6 211 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 PLEKHO2Q8TD55 490 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 JPH3Q8WXH2 748 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 NDRG1Q92597 394 aaKnown RBP9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 LARP4BQ92615 738 aaKnown RBP9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 CCDC127Q96BQ5 260 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 PLD4Q96BZ4 506 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 ABHD17AQ96GS6 310 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 CGRRF1Q99675 332 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 CCDC3Q9BQI4 270 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 CALN1Q9BXU9 219 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 EPB41L5Q9HCM4 733 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 PNPLA8Q9NP80 782 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 DNAJC28Q9NX36 388 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 SALL4Q9UJQ4 1053 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 PNMA8BQ9ULN7 279 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 CSNK1G3Q9Y6M4 447 aa9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 ANKHD1Q8IWZ3 2542 aaKnown RBP9.16□□□□□ -0.94
TRAPPC9-212ENST00000521944 SVILO95425 2214 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 FRMD3A2A2Y4 597 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 POM121BA6NF01 834 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 RNF103O00237 685 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 AGRPO00253 132 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 SLC7A4O43246 635 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 TBL1XO60907 577 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 RNGTTO60942 597 aaKnown RBP9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 VNN1O95497 513 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 CSF2P04141 144 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 PRF1P14222 555 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 NME1P15531 152 aaKnown RBP9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 TNNI1P19237 187 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 ATICP31939 592 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms